Myxocyprinus asiaticus (Chinese sucker): 127453293
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Entry
127453293 CDS
T08782
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127453293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127453293
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127453293
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127453293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Peptidase_S46
DUF4407
Motif
Other DBs
NCBI-GeneID:
127453293
NCBI-ProteinID:
XP_051575528
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All DBs
Position
15:18317040..18326822
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AA seq
919 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKSISFNAQLHNAANANQKEKYEADLKKEIK
KLQRLRDQIKTWVASSEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQK
VDPAQKEKEETEQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLI
ERHRYHIRMLETILRMLDNDSIQVDSIHKIKDDVEYYIDSSQDPDFEENEFLYDDLDLED
IPTALMATSPQGHTEDEMFLQSSSTPTSTTSSSPIPPSPATGIMENSDDKRGRSTDSEVS
QSPVKNGNPSLSSFSSASSGSSSSSSSSSSSSSSSSSSLVSMATVVGSCTAVSGGSNLLG
SFSSAVQQHPPQSQQQAQVKLSSTSAPSNNTPSPPSHPILPASTSSSMPSSSTPGPVTSN
SQSQASTGPGAGGSSHGLCLGLGKGGVTVTSSSSVGQIPGLSLTGLSGSLNTMAGLLSGS
TPAPYAQAAAGGTANSASSGPMGSSSSSSGISAQSGGAGGVGTSATSNGTGTGASMGLLG
SSPGHGTLSGGILNLVPGQTALQGSAQVPVSPVGTALGGGTGEGGLGGNGSSAVGSGGVG
TSRVPTRPPSGLKQNGATSYSAVVADNTPDSSLSSASQTQNSHSSSSSSSTNQTLDNGPS
LLSSITLPPSSPSPAFTDSTPGGGSLLNGPHSYTPNTEAIKAPEPPSSLKAMAERAALGL
ALDGEIPSLHLTDRALFSGSSAPTAPTSAPQPAVSEVNLPPSLGACPLGPTPLTKEQLYQ
QAMQESAWTHMPHPSDSERIRQYLMRNPCPTPPFHHQVPPHHSDSIEFYQRLSTETLFFI
FYYLEGTKAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQ
RKKEGFTFEYRYLEDRDLQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagaaaacttcaaggtgaaatagatcgatgtttgaaaaaagttgctgaa
ggcgtggaacaatttgaagacatttggaaaaagtctatttcatttaatgcacagcttcac
aatgctgcaaatgccaatcagaaggagaaatatgaggcagatcttaagaaagagattaaa
aagctccagcggctacgagaccagattaagacatgggtggcatccagtgagatcaaagac
aaacggcagctagtggagaaccgcaagcttattgaaacgcaaatggaacgctttaaggtt
gttgaaagagagaccaagacaaaggcctactcgaaagaggggctgggcttggctcagaaa
gtggacccagcacagaaggagaaggaggaaacagaacagtggctcacgaatacaatagac
actttgaacatgcaggtggaccagtttgagagtgaagttgagtccctctctgttcaaaca
cgaaagaaaaaaggagacaaggagaagcaggatcggattgaagagctcaaaaggttaata
gagaggcatcggtaccatattcgtatgctagagaccatcttgaggatgctggacaatgat
tcaatccaggtggattctatccataagatcaaagatgatgtggagtactacattgactct
tcgcaagacccagactttgaggagaatgagttcctctacgatgacctggacttggaggac
ataccaactgccttgatggcaacatctcctcagggccatactgaagatgagatgttcctt
cagtccagcagcaccccgacctccaccacttcctcttcccccatccctccatctcctgcc
acaggcatcatggagaattcagacgataaaagaggtcgatcaacagacagtgaagtcagt
cagtctcctgtgaagaatggaaacccatctctctcatccttctcatctgcctcgtcaggc
tcctcctcctcctcctcctcctcctcctcgtcctcctcgtcctcctcttcttctctggtc
tccatggctactgttgtcggaagctgcacagcggtctccgggggcagcaacctgctggga
agctttagcagcgcagtacagcagcatccacctcagtctcaacagcaagcacaagtcaaa
ctctcctccacatctgcaccttccaacaacacaccgagcccacctagccaccccatacta
cctgcctccacttcttcctctatgcccagttccagcacacctggtccggttacttccaat
tcccagtcccaggcttcaacagggcctggggccgggggctccagccacggactgtgttta
ggcctggggaaaggaggtgtgacggtgaccagcagcagtagtgtgggtcagataccaggt
ctaagtctgacagggttatctggttctctcaacaccatggcagggcttctctcaggctct
acccctgccccttatgcccaggcagctgctggtggaacagcaaatagtgcctctagtggt
ccgatggggagtagcagcagtagttctggcatatctgcacaaagtggaggtgccggggga
gtgggcacaagtgcaactagtaacggtacgggtacaggggcaagtatgggtctactaggg
tccagtccgggtcatggaactctaagcggaggtattctgaacctggtacccgggcagaca
gctcttcagggatctgcacaggtacccgtgagtcctgtggggacagcacttggtggagga
accggcgagggtggactggggggcaacgggagcagtgcagtgggaagtggtggcgtggga
acaagcagagtacctacgagaccccccagcggcctcaaacaaaatggggcaaccagttat
agtgctgtggttgcagacaacacaccagactcctccctcagcagtgccagccaaacacaa
aacagccattcctcttcctcaagctcatcgacaaatcaaactctggataatggccccagt
ttattgagttctatcactctacccccctcctctccatcacctgctttcactgacagcaca
cctggtggtgggagtctgctaaatggcccacactcctatacacccaacacagaagccatc
aaggctcctgaaccaccgagctctctgaaagcaatggcagagagagctgcacttggattg
gctctagatggagaaatcccatcactacacctcacagatcgagctctgttctcgggatcc
tcggctccaactgctcccacatcagccccccagcctgctgtttcagaggtcaacctccca
ccatctttaggggcgtgtcccctaggccccacccccctcacaaaagagcagctctaccag
caagccatgcaagaatcagcatggacacatatgccccacccgtctgattcggaaagaatc
aggcaatacctgatgagaaacccttgtcctacaccgccattccaccatcaggtgccccca
catcattcggactctattgagttctaccagagattgtccactgaaactctctttttcata
ttctactatctggagggcacaaaagcgcaatacctgtcggctaaagcactgaagaagcaa
tcgtggaggtttcacaccaagtacatgatgtggttccaacggcacgaggaacccaagacc
atcactgatgagtttgaacagggcacgtacatttactttgactacgaaaagtggggccag
agaaaaaaggaaggatttacatttgagtacagatacctggaggacagagatctgcagtga
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