Myxocyprinus asiaticus (Chinese sucker): 127453379
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Entry
127453379 CDS
T08782
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127453379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127453379
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127453379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_14
ARM_TT21_N
TPR_8
TPR_19
ARM_TT21
TPR_7
TPR_10
ANAPC3
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
127453379
NCBI-ProteinID:
XP_051575667
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Position
15:34625893..34642527
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AA seq
758 aa
AA seq
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MAETGSDQADDMKHDSTSYPGISDQEKEMAANAFEAFKTGSYDVSLKHLDCLQELNKEDY
KISMNKAVAEFFKTGQTTTGTLKQTLMILKNQMHTSVDDIDGLDDVENSILYYNQAVIHY
HMRQYSEAISIGEKLYQFLEPFGTFSYSTGLNQRFAQAICFLLVDLYLLTFQPEKALHLL
AVLEKLTMKEGTNKNGKGESTSSTNKESAAQKADFTAMIEAAKSKMHQYKVQAYIQMKSL
KACKREIKSVMNTTGNSASSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPLKTGECVR
CMFWNNLGCIHFAMGKHNLGLFYFKKALQENDHTCAQLGDSSNGPAAKKFTGIPMCALLA
NKRYELLYNCGIQLLHLGRPLAAFECLMEAVQVYHSNPRLWLRLAECCITANKGSSEQET
KGLPCKKGIVQAVVGLGYHRKIVLASQSTQNTIYSEGQSAAIPVASMEFAAICLRNALLL
LPEHQQHDSKPDNGSKSCNQSGSMESGSETSDACSGKSQEGNKFIPAAPSSPLRKQEVEN
LRCSILACSAYVALALGDNLMALNHAEKLLHQTKLSGSLKFLGHLYAAEALISLDRISDA
IAHLNPENITDVSLGVSPSEQDQGSDKGDLEPVESSGKQTPLCYPSSVSSARATMLFNLG
SAYCLRSEYEKARKCLHQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLP
SVKPVSSPDLCKKPAPFQSSQPVHPIQTPSSFTQVQRK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactggctcagatcaagcagatgacatgaagcatgacagcacttcataccct
gggatctcagatcaagagaaagagatggcagccaatgcttttgaggcctttaagactgga
agctatgatgtgtccctgaaacacctagactgccttcaggagttgaacaaggaggactac
aagatttcgatgaataaagctgtcgccgaattctttaaaactggacagacaacaaccggc
accctgaagcagacgttgatgatcttgaagaatcagatgcacacatctgtggatgatatt
gatggtttggatgatgttgaaaacagtatcctttactacaatcaagcggtgattcattac
cacatgcgacaatattcagaagctatatccatcggggagaagctctaccagtttcttgaa
ccttttggtacgttttcgtactccacaggtttgaaccagaggtttgctcaggccatttgt
ttcctgttggtggatctttacctgctcaccttccagccagagaaggccctgcatctgctg
gctgtgctggagaaactgaccatgaaggaaggaaccaacaagaatggcaaaggagagagc
accagcagcacaaataaagagtctgctgctcaaaaggcagatttcacagctatgatcgag
gcagctaaatcaaagatgcaccagtataaagtacaagcctatatacagatgaagtcactg
aaggcctgcaaacgagaaatcaaatctgtgatgaacacaactggtaattctgcttcctca
ctcttcttgaagagtaattttgagtacttgaggggaaattaccgtaaagctgtaaaactc
ctcaacagttcaaacatcgcagaacatccaggacccttgaaaacaggtgaatgtgtgagg
tgtatgttctggaataatctaggctgtatccattttgccatggggaaacacaaccttggt
ctgttttacttcaaaaaagcacttcaggaaaatgaccacacatgcgctcagcttggggac
agcagtaatggaccagcagctaagaagttcacaggcatccccatgtgcgctttgttagct
aataagcgctatgagcttctgtataactgtgggattcagttgcttcatctcggccggccg
ctggcagcttttgagtgtctgatggaggcggtgcaggtgtatcactctaaccctcgactc
tggctcagacttgcagagtgctgcatcacagctaataaagggagttcagagcaggaaaca
aagggtttgccctgtaaaaaggggattgtacaggctgttgttgggctgggctaccatcgc
aagattgttctagcatcacagtccacacaaaacaccatctacagtgagggtcagtcagca
gcaatcccagtggccagtatggagtttgcggcaatctgtctgcgtaacgcattgctcctg
ctaccagagcaccaacagcacgacagcaaaccagacaacggctccaagagctgcaaccag
tcaggcagcatggaaagcggcagcgagacaagcgatgcctgcagtgggaagagtcaagag
ggaaacaagttcattcctgctgccccctcatcacctttgagaaaacaagaggtggagaat
ctcaggtgctcaattctagcatgcagtgcatatgtggctcttgctcttggggacaactta
atggctcttaaccatgcagaaaagctcctacatcaaacgaagctatcaggatctctcaag
ttcctgggtcacctatatgctgctgaagccctgatctctctggacagaatttctgatgct
attgcacatctcaacccagagaacattactgatgtctcattaggggtgtcacccagcgaa
caagaccaaggttctgataaaggagatctagagcctgtggagtcctcagggaagcagact
cctttatgttaccccagctcagtgagctccgccagggccacaatgctcttcaacttaggc
agtgcgtattgcttgaggagtgagtatgagaaagcccgcaagtgccttcatcaggctgct
tcaatggtgaacaccaaggagattcctccagaagccattttactgggtgtctacttagaa
ctccagaatggaaacacacagctggccctacagatcatcaaacggaatcagctcctcccc
tccgtcaagcccgtctcctcccctgacctttgcaagaaacctgctcccttccagtcatcc
cagcctgtacaccccatacagacaccctcctcctttacacaagtacagcgcaagtga
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