Myxocyprinus asiaticus (Chinese sucker): 127453428
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Entry
127453428 CDS
T08782
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
masi00535
]
127453428
Proteoglycans [BR:
masi00535
]
Extracellular matrix (ECM) proteoglycans
Others
127453428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
FN3_Tor_3rd
VWA_3
Motif
Other DBs
NCBI-GeneID:
127453428
NCBI-ProteinID:
XP_051575712
LinkDB
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Position
15:29548172..29742676
Genome browser
AA seq
1615 aa
AA seq
DB search
MFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNGFSTKDAVIDAVKNLPYKGGNTLTG
LALTYILENSFKPESGARMDVPKIGILITDGKSQDDVIPPAQILREAGIELFAIGVKNAD
ENELKAIASEPDETHVYNVADFSIMSTIVDGLTRTVCDRVEQQDKEIKQDSYPEETAFPP
QDLVISDVTAHSFHVSWTHAPGNVERYRVVYHPTRADVLEEIVVSGTENSVLLQNLNSLT
EYEIAVFALYRSSASDALRGNEITLALPTVSDLELYDVTDNSMKARWRDAQGASGYMILY
APLSTDTIDERELKVDETVNDVELKGLIPDTEYSVMVYAMFGEVASDPATAQETTMSLRP
PHNLRITEVDHSSVRLNWDTVSSKVKGYVVLYIKTDGVHTNEVVLGPVTNVYLKNLSPST
EYTVAVFALYDAGQSEPLSGGFTTKLVPPPFSLMTTEVTSESLRVRWSHPARDVVLYKLA
WSATGGGDEKEMLLNGAVDSYVIQNLSPLTNYKVSLSAVYKDETESIAVVLLENTLGWTT
APTTLAFTTAIVRLGVTNLWVDDETPFSLQVSWEVLDSDVKQYKVTYVSADHAEETVLVP
ENRMRVILQPLLSETEYKITVTPIYADGESTILSMASSGKTLALSAPSNLRVSEEWYNRF
RISWDTPQITTLGYRVIYQPISVSGPALEKFVGDDVDTMLLPDLLSGTEYSIQVITSYTS
GSSQPLTGKGRTLFLGVNHLNTYQVHSTSMCAQWQPQHNASLYRVVIESMLNGQKQEVKI
GGSVSRQCFFKLSPNTQYKISVFTLLQDLEGPAVITMATTSPAPTQPPTVSPTTIPPPTI
PPAKEVCKAAKADLAFLVDGSWSIGDDNFQKIIRFLYSTTGALDVIGPEGTQVAIAQFSD
DARTEFKLSSYSDKESLLDAVQRISYKGGNTKTGRAIKHVKEAIFTEDAGVRRGIPKVLV
VLTDGRSQDDVNKISKEMQMEGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDAFK
KIEEQLITFVCEAATATCPSVLMSGNTLAGFRMMEMFGLVEKRYSSVQGVSMEPGTFNSF
PCYRLHKDALISQPTRYLHPEGLPSDYTITVLFRILPETPEEPFALWEILDKNNQPLVGI
ILDNGGKTLTFFNHDYKGNFQTVTFEGTEIKKMFYGSFHKLHVAISKTTAKVVIDCKTVG
EKPINAAGNITIDGVEVLGRMVRSHGRRDNSAPFQLQMFDIVCSTSWASRDKCCELPGLR
VEQDCPAMPHACTCAQDSKGPPGPSGPPGGPGIRGSRGDRGEPGLMETARHSHFVSAAQL
VGPQGLPGEIGPLGPQGPPGPQGPNGLSIQGPPGALGEKGEKGETGLPGPQGVPGASGGP
GREGPPGQRGLPGKDGPQGRVGPPGPMGSPGAPGAPGSSGPPGPMGDQGLPGPPGTKGER
GERGDIQSQAAVRAIARQVCEQLIQSHLSRYNSILNQIPSQTVSVRTVPGPPGEPGRPGP
PGPQGEQGPSGRPGFPGASGQNGSPGERGLPGERGEKGSPGVGTQGSRGPPGPQGPPGEG
RTGSQGPPGRPGILGTPGHPGTPGNPGPAGPPGYCDQNSCLGYNGGGPEQYGNDY
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgttcctggaaaacctggtcaatgcgtttgatgtgggaatagacaaaacccggatcggt
ctggcccagtacagtggagatccgaggattgaatggcacttgaatggcttcagcacaaaa
gatgcagtgatagatgctgtcaaaaacctgccatacaagggaggcaacactcttacaggt
cttgctctcacctacatcctggagaacagcttcaaacctgagtctggggctcgtatggat
gttcccaaaattggaatcctgataactgatggcaaatcccaggatgatgtcatcccgcct
gctcagatcctgagagaagctggaatcgagttatttgccattggtgtaaagaacgcagat
gagaacgagttgaaagccatcgcctctgaaccggatgagacacacgtttataatgttgct
gacttcagtatcatgagcactatagtggatggtctgaccaggactgtgtgtgatagagtg
gagcagcaggacaaagaaatcaaacaagattcttatcctgaagagacagcattcccacct
caggacttggtcatttctgatgtgactgcacacagtttccatgtgtcctggactcacgct
cctggcaatgtggaaagatatcgcgtggtttaccatccaaccagagcagacgtgctagaa
gagattgtggtgagtggcactgagaattcagtcctactgcagaatttgaactctctgact
gagtacgagatcgctgtgtttgctttataccgcagctcagcgagtgacgctctcagaggc
aatgagatcacattggctctacctacagtgagtgatcttgaactgtacgacgtgactgac
aatagcatgaaagctcgctggagggatgcacaaggggcttctggatacatgatactgtac
gctccactgagcactgacactatagatgaaagagagctgaaggtggatgagacagtgaat
gatgtggaactgaagggcttgattcctgatacagagtattccgtgatggtctatgccatg
tttggagaggtggccagtgatccagctaccgctcaagagaccaccatgtccctgaggcct
ccacataatctgcgtatcactgaagttgaccacagctctgtccgactcaactgggacaca
gtgtccagtaaggttaagggctacgttgtcctgtatatcaagacagatggtgtccatacc
aatgaggtggtgttgggtccagtcaccaatgtgtaccttaagaacttgtcaccctcaaca
gagtacaccgttgcagtttttgctctttatgatgccggtcaatcagagccactcagtgga
ggattcactacaaagctcgttccgcccccattcagcctgatgactactgaggtcacctca
gagagtctccgggtgagatggtcacaccctgccagggatgtggtgctctataagctggcc
tggtcagcaactggaggaggagacgagaaagagatgctgctgaatggagctgtggactcg
tatgtgatacaaaacctgtctcctctcacgaactataaggtgtcactatcggccgtctat
aaagatgagacagagagcattgctgtggtcttgttagaaaacacattaggctggaccaca
gctccaaccaccctcgccttcaccacagcaattgttcgactgggcgtgactaacctgtgg
gtggatgacgagacccccttcagtctacaagtgagctgggaggtgctggactcagatgtg
aagcagtacaaagtgacatatgtcagtgcagaccacgcagaggagacagtgttagtcccg
gaaaacaggatgagagtgatcctgcaacctctcctctcagaaacagagtacaagattaca
gtgacccctatttatgcagatggagagtccaccatactatccatggcctcttccggcaaa
acattggcactatctgctcccagtaaccttagagtgtctgaggaatggtacaatcgcttc
cgcatcagctgggacacccctcaaatcaccactttgggttacagggtcatctatcagccc
atctctgtgtcaggtccagctctagagaaatttgttggggatgatgtggacaccatgctg
ctccccgatctgctgagtggcacagagtacagcatccaggtcatcacctcctacaccagc
ggatccagccaacccctcaccggcaagggcaggacattgttcctgggggtgaatcatctc
aacacataccaggtgcacagtaccagcatgtgtgcacagtggcagcctcaacacaatgcc
tccctctacagagtcgtcattgagtcaatgctcaatggacagaaacaggaagtgaagatt
ggtggcagtgtatccaggcagtgcttctttaaactttctcccaacacccagtacaaaatc
agcgtcttcactcttttacaggacttggagggcccagctgtcatcaccatggcaactact
tctccagcacccacccaaccaccaactgtatcacctactacgatccctcctcctacgatc
cctccagctaaagaagtttgtaaagcagccaaggcagacctggctttccttgtagatggc
tcgtggagtattggagatgacaactttcagaagattatccgcttcctatacagcacaact
ggtgcgcttgacgtgattggcccagagggaacacaggtggccattgctcagttcagtgac
gatgccaggactgagttcaagctcagctcctatagtgacaaggagtctctactggacgct
gtgcagcgcatctcctacaagggtggaaacactaagacaggccgagccattaagcatgtt
aaggaggccatctttactgaggatgctggtgtaaggaggggaattcctaaagtgctggtg
gtgctcacagacggacggtcacaggatgatgtcaataagatctccaaggagatgcagatg
gagggctacatcatctttgccattggctttgccgatgctgactacggggagctggtgaac
attgccagtaaacctagcgagagacatgtgttctttgtagacgatttggatgctttcaag
aaaattgaagaacagctcataacttttgtctgtgaggctgcgactgccacttgcccctcg
gtgttaatgagtgggaacactttagccggcttccgaatgatggagatgtttggtttggtt
gaaaagcgctacagcagtgtgcaaggtgtctcaatggagcctggaaccttcaacagcttc
ccctgttacaggctgcacaaggacgcactcatctcccagcctaccaggtatctacatcca
gaaggccttccctctgactacacgataacagtgctcttccgcatactgcctgaaactcct
gaggagccttttgcattgtgggaaatacttgacaaaaacaatcagccactggttggcatt
atcctggacaatggagggaaaaccttaaccttcttcaatcacgactacaagggaaacttt
caaacggtgacttttgaaggaaccgaaattaagaaaatgttctatggcagtttccataag
cttcatgtggccatcagcaaaaccacagccaaagtggtgatcgactgcaagacagtggga
gagaaacccatcaatgccgcaggaaacatcactattgatggagtcgaggttctgggacgc
atggtccgctctcatggaaggagggacaactcagcaccgtttcagctccaaatgtttgac
atagtctgcagtacatcatgggccagtcgtgataagtgctgtgaactcccaggattgaga
gtagaacaagactgtcctgccatgccccatgcctgcacctgtgctcaggacagcaaagga
ccacccggaccctctggaccaccaggcggtccaggtattagaggttcaagaggagatcga
ggggagccaggcttgatggagactgcacggcattcacactttgtttcagcagcccagctt
gtggggcctcaagggctacctggtgagattggacctcttggaccacaggggccaccaggt
cctcaggggccaaatggactgtccattcaggggccaccgggggctctaggagagaaagga
gagaagggtgaaactggtctgccaggccctcagggtgtaccgggtgccagtggagggcct
ggcagagaaggacctccaggacagagagggctgcctggtaaggatggaccccagggacga
gtaggtcctccaggacctatgggaagccctggggcacctggggccccaggatcaagtgga
ccaccaggaccaatgggtgatcagggactgcccgggcctcctggcactaaaggcgagcgg
ggggagaggggtgacatacagtctcaggcggctgtccgtgccatagcacgacaagtttgc
gagcagctaattcagagtcacttgtctcgctacaactccatcctgaaccagattcctagt
cagactgtttcagtacggacagttccaggtcctccaggtgagcctggtcggccagggcct
ccggggccacaaggagagcagggtccatctggcagaccaggattccctggagccagtgga
caaaacggcagtccaggagagagaggtctaccgggagaaagaggcgagaaaggcagccca
ggggtagggacacagggctcccgcggtcccccaggaccccaagggcctccaggagaaggt
cgaacaggcagtcagggccctccagggagacctggcattctgggcacccctggacatcca
ggtacccctggtaaccctggccctgcaggaccccctggctactgcgaccagaactcctgc
ctcgggtacaacggtggaggtccagagcagtatgggaatgactactga
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