Myxocyprinus asiaticus (Chinese sucker): 127453446
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Entry
127453446 CDS
T08782
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127453446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127453446
03036 Chromosome and associated proteins [BR:
masi03036
]
127453446
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127453446
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127453446
PBAF complex
127453446
GBAF(ncBAF) complex
127453446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT_2
Motif
Other DBs
NCBI-GeneID:
127453446
NCBI-ProteinID:
XP_051575745
LinkDB
All DBs
Position
15:9167308..9204736
Genome browser
AA seq
1099 aa
AA seq
DB search
MATAATAAGGTGSGGPSAGQAGAGASIGRKKDGGPSSKFWESSETVSQLETVRLWIGKHY
KKYVQTDSPTSKSLTALVVQLLQFQEDAFGRRVSNPALTKLPAKIFLDFKPGGALCHILG
SAYKFKSEQGWRRFDLQNPSRMDRNVEMFMTIEKTLVQNNSLTRPIVYIVSDVEQKQVSK
LKDIIKRHQGTITEDKLKATHIIYPSPAQLEEEEWLRPVMRKDKQVLVHWGNYPDSYDTW
VSTSDIDGDVEDPPSSEKPWRVHAKWVVDTDAFNEWMNEEDYEVDENKKPVSFRQRIFPG
EEVSSRTPDRKERKSLVAGKKRRRSPSPPSTPAESRKKGKKGNPGSQWRRRGHQNDDEQD
EDLTKDLEDPSPVPGMEEVTLSKNVNQKKDNENTPVKGGTVADLDDQEYDSVASGGKDDE
EQGKTEVNRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPE
IYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAESRP
LPMGPPPTPHFNVLADTPSGLVPLHHRPPQVPSAQQMLNFPEKDKDKPTDLQNFGLRSDV
YTKKNPKGKGAAGGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDPYLESSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVR
EEVPMELVEAHVKKVQEAARNTGKVDPAFGLESSGIAGTAPEEPEKTETTETEKMESDSD
SQQPDKAESKDEAEKPSESAEKPAEAEKEKNETTEKSEPQHEEEEEKENESGGAKTAEKE
KEEPMETTEEGKEGEEEQEEGKKKLELDIGEGNIATAAAAALASAATKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEM
KARQQMEQQAAAAQQNAGGHHGPAPPLHGPPPGIHPGHPGHPGHPGPGYPPMHHAMGPHH
GPQTGPMVGPGQPMPGRIMPGPSPVGPPQGGLPPMMGPRHPGPPNGMFPGPPPPQPTQPD
GMPPGPVGPPALLPRAAEN
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgactgcagcgggcggaacgggctccggaggaccatcagccggccaa
gcgggcgcaggtgcttcgatcggacggaaaaaagatggaggaccttcttctaaattctgg
gagagctcggaaacggtgtcccagctggagacggttcgcctgtggatcgggaaacattac
aagaagtatgtccaaactgactctcctacaagcaaatctttgactgcactggtggtgcag
ttgctgcagtttcaggaggatgcatttgggcgtagggtcagcaatcctgctctcaccaag
ctacctgccaaaatctttctggatttcaaacctggaggagcactttgccacattcttgga
tctgcctataagttcaagagcgagcagggctggaggaggtttgatctgcaaaacccgtcc
agaatggacagaaatgttgagatgtttatgactattgaaaagactcttgttcagaacaac
tctttgactcgaccaattgtgtatattgtgtctgatgtggagcaaaagcaagtcagtaaa
ctcaaagacatcatcaagagacatcagggaaccatcactgaagataagttgaaggccact
catatcatttacccctccccagcccagctggaagaagaggaatggctgcgtcctgttatg
cgcaaagacaagcaggtgctggttcactggggcaattatcctgacagttatgacacatgg
gtatcaacaagtgacattgatggagatgttgaggatccaccaagctctgagaaaccatgg
agggtgcatgctaaatgggtcgtcgacacagatgctttcaacgagtggatgaatgaggaa
gattatgaggtggatgaaaacaaaaagcctgttagttttcgccagcggatcttcccaggg
gaagaagtgtcttcccgtacacccgatcgcaaggaacgaaagtccctggttgctggcaag
aagaggagacgctctccctccccacccagcacccctgcggagtctcgcaaaaagggcaag
aaagggaatcctggatcacagtggaggcgccgtggacatcaaaatgatgatgagcaagat
gaagacctcacgaaggacctggaagatccctcccctgtgccaggaatggaagaggttaca
ctgtcaaaaaatgtcaatcaaaaaaaggacaatgagaacacaccagtaaagggcggaaca
gttgctgatttggatgaccaggaatatgattctgtagcatctggtggcaaggatgatgaa
gaacagggcaaaacagaggtcaatcgtctgatcgactcggaggacaatgtgactgagcaa
actcatcacatcattatccccagctatgccgcatggttcgactacaacagtatacatgaa
attgagaggcgtgccctgccagagttcttcaatggcaaaaacaaatctaagactccagag
atatatctggcttatcggaacttcatgattgacacataccggctgaatcctcaagagtac
ttgacctccacctcctgcaggaggaacctcactggagatgtgtgtgctgtcatgagggtg
catgctttcttggagcagtggggactggtaaactaccaggttgatgcagagagcagaccc
ctccctatgggccctccaccaaccccacactttaacgtactagctgatactccctccggc
ttggtgccgctgcaccaccgccctcctcaggttccctctgcacagcagatgctgaacttc
ccagaaaaggacaaagacaagccaactgacctgcagaacttcggcctccgttcagatgta
tacacaaagaagaatcccaagggtaaaggagccgctggtggcagagagtggactgaacaa
gaaactttgcttctgttggaggctctggagatgtataaggatgactggaacaaggtttca
gagcacgtgggcagccgtacgcaggatgagtgcatcttgcatttcctgcggctgcccata
gaggatccatacctggagagttctgaagcctcgctaggtcctctggcttaccagccgata
cccttcagccaatcaggaaatcctgtcatgagcactgttgcattcctcgcctctgtggtc
gacccacgtgtggcagctgctgctgcaaaggcagctctggaggagttctcccgtgtgcgt
gaggaggtgccaatggagctggtggaggcgcatgtaaagaaggtgcaggaggcagcacgc
aacacaggaaaagtggaccctgcatttggccttgagagcagtggcattgctggcaccgca
cctgaggagccagagaagacagaaacgacagagacagagaagatggaatcagactctgac
tcccagcagcctgataaggcagagtcaaaggatgaagcagagaagcccagcgagtctgct
gagaagccagcagaggcagagaaggaaaagaacgagactacagagaagtctgagccacag
catgaggaggaggaggagaaagagaatgagtcaggaggcgcaaagactgcagagaaagaa
aaggaggagcccatggagaccactgaagaagggaaggagggagaggaggagcaggaggaa
ggaaaaaaaaagctggagttggatatcggcgagggcaacattgccactgctgccgctgct
gctctggcttctgctgccaccaaggcaaagcacctggctgcagtggaagagaggaagatc
aagtctcttgtggctctgctggtggagacacagatgaagaagctggagatcaaactccga
cactttgaggagctggagaccatcatggaccgtgaaaaggaagcactggagctccagaga
cagcagctgctgacagagcgacaggcattccacatggagcagctgaagtatgctgagatg
aaggctcgtcagcagatggagcagcaggcagccgctgcacagcagaacgcaggtggacac
catggacctgcccctcctctacacggcccacctccgggcatacaccctggacacccgggt
catcctgggcaccctggccctggatatccaccaatgcaccacgccatgggtccccaccat
ggcccacagacaggaccaatggttggaccaggtcagcctatgccaggccgaattatgcct
ggaccttccccagttggccccccacagggcggtctgccacccatgatgggacctcgacac
cctggaccacccaacggcatgttcccaggacctccccctcctcaacctacacagcctgat
gggatgcctcctggcccagtgggacctcctgcactgcttcctcgtgctgctgaaaactaa
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