Myxocyprinus asiaticus (Chinese sucker): 127453881
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Entry
127453881 CDS
T08782
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127453881
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127453881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
RuvA_C
Phage_Arf
UBA_N4BP1_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
127453881
NCBI-ProteinID:
XP_051576588
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All DBs
Position
16:complement(44200901..44215590)
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AA seq
583 aa
AA seq
DB search
MQSRCCHPPTSLGQDGPDLQMKVDFFRKLGYSPQEVKAALQKLGLGTDTNAVLGELVRSG
AKALPSSNSDSDDSGFSLPYRGGSSSRGQGSRDVSLEASTEPDNNLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVSYFLERGHRHITVFVPSWRKEQPRPDVPISDQHILGELERKKILV
FTPSRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRSIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKTMLQDHKRQLCPYGKKCTYGIKCKFYHPERTKQS
QRSLADELRENAKLSGSKEDSRGTGSLRGMYQRYDPGFGSCSPSLEQELEQKLNLESERN
DSRDAMLHYCDEIFSMNKSLHPATDRTSLPPPFPTYPSSIFSSDSGLGSFSEPSQSLDEL
HRMRPSHPSISSSCGGSSNPALPAGGQHYHNNMSPFSNHQPNYSAYSSLPLSNPVQRYSL
PTYIQPSGWSYPCYVQSMQTSSLPEPLPCPSFHRSVDGYGSQQHSGMQQSNAFQEERQEL
RKKLHAIFNPHHVDKVMEMFPQLKDPQQLAAEVLKLKSKGEFF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaggtgttgccacccacccaccagcctgggacaagatggccctgacctgcag
atgaaggtggatttcttccgtaaactgggttactctccacaggaggtgaaggccgctctg
cagaagcttggcctgggcacagacaccaatgcagtactgggcgagctggttcgttcgggg
gcgaaggccttgccctcctctaactcagacagtgacgatagtggcttcagtttgccatat
cgtggaggaagctcttcaaggggacagggctcaagagacgtgtcgttggaggcctccact
gagcctgacaataatctgaaacctatagttattgatggcagcaatgtggccatgagtcat
gggaacaaggaagtgttttcatgccgagggattgagctggctgtcagctacttccttgag
cgaggacacaggcatattactgtgtttgtgccctcctggagaaaagagcagcccaggcct
gatgtgcccatttcagatcaacacattttaggagagctggagagaaagaagattcttgtg
tttacgccttcacgacgggtaggaggaaagcgtgtggtgtgctatgatgatcgcttcatt
gtcaagctagctcatgacctggatggcattatagtgtccaacgacacatatcgcgacctg
cagagtgaacggccggagtggaaacgttccattgaagagagattgctaatgtactccttc
gtcaatgacaagtttatgccacctgacgaccctctcggccgacatggacccaacttggat
aatttccttcggaaaaaaacaatgttacaagaccacaagcgccaactctgtccatatggg
aaaaagtgcacatatggtatcaagtgtaagttctaccacccagagcgcaccaagcagtcg
cagcgctctctagccgacgagctcagagaaaatgccaaactgtctggatctaaagaggac
agtcgaggaactggctcattaagaggcatgtaccaaagatacgaccctggttttgggtcc
tgctctccgtctttagagcaagaactggagcagaagctcaatctggaatctgagagaaat
gacagcagggatgccatgctccattactgtgacgagattttctccatgaacaagtccttg
catccagccactgaccggaccagtctcccacctccattcccaacatacccttcatccatt
ttcagttccgactctgggctcggctccttttcagagccgtcccagagcctggatgagtta
cataggatgagacccagtcatccatcgatatccagtagctgtggaggttcctcaaaccca
gctttacctgcaggtggccagcactaccacaacaacatgagtcccttctccaaccatcag
cccaactatagtgcctacagctctctacctctgtccaaccctgtccagcgttacagtctt
cccacttacatccagccaagcggctggtcttacccttgctatgtacaatcgatgcagaca
tccagtttaccagaacctctcccctgtcctagcttccataggtctgtcgatggttatgga
agccaacagcactcaggcatgcaacagtccaatgctttccaagaggaacgccaggagctc
aggaagaagcttcatgcgattttcaacccacatcatgtagacaaagttatggaaatgttc
ccacagctaaaagatccacagcagctggctgcagaagttctcaagctgaagtccaaggga
gagttcttttga
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