Myxocyprinus asiaticus (Chinese sucker): 127454246
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Entry
127454246 CDS
T08782
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127454246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127454246
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127454246
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127454246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
127454246
NCBI-ProteinID:
XP_051577271
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All DBs
Position
16:18447356..18468598
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AA seq
900 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEETEQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRYHI
RMLETILRMLDNDSIQVDAIHKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEEIPATLMA
TSPQSHMEDEMFLQSSSTPNSTTSSSPIPPSPATGTMENSDDKRGRSTDSEVSQSPVKNG
NLSLSSFSSSTSSGSSSSSSLVSMATVVGGCTAVSGGSSLLGSFSSAVQQHPPQSQQQTQ
VKLSSTSAPSNNTPSPPSHSTLPASTSSSLPSSSTPGQVTSNSQSQASTGSGAGGSSHGL
GLGLGKGGVTVSSSSSVGQIPGLGLTGISGSLNTMAGLLSGSTPAPYAQAAAGGTASNAS
SGPVGSSSSSSSGISAPSGVAGVVSIVATSNGTGTGAGMGLLGSSPGHGALSGGILNLVP
GQTALQGSTPVSPVGTAPGGGTGESGLGGNGSSAVGSGGVGTSVAPARPPSCLKQNGATS
YSAVVADNTPDSSLSSASQSQNSHSSSSSSSTNQTLDNGLSLLSSITLPPSSPSPAFTDS
TPGGGSLLNGPHSYTPNTDAIKAPEPPSSLKAMAERAALGLALDGEIPSLHLTDRDLFSG
SSAPPGPTTVPQPAVSEVNLPPSLGACPLGPTPLTKEQLYQQAMQEAAWTHMPHPSDSER
IRQYLMRNPCPTPPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKK
QSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagaaaacttcaaggtgaaatagatcgatgtttgaaaaaagttgctgaa
ggcgtggaacagtttgaagacatttggaaaaagcttcacaatgctgcaaatgccaatcag
aaggagaaatatgaggcagatcttaagaaagagattaaaaagctccagcggctacgagac
cagattaagacatgggtggcatccaatgagatcaaagacaaacggcagctagtagagaac
cgcaagcttattgaaacgcaaatggaacgctttaaggttgttgaaagagaaaccaaaaca
aaggcctattctaaagaggggctgggcttggctcagaaagtggacccagcacagaaggag
aaggaggaaacagaacagtggctcacgaatacaatagatactttgaacatgcaggtggac
cagtttgaaagtgaagttgagtccctctctgttcaaactcgaaagaaaaaaggagacaag
gagaagcaagatcggattgaggagctcaagaggttaatagagaggcaccggtaccacatt
cgtatgctagagactatcttgaggatgctggacaatgattcaatccaggtggacgctatt
cataagatcaaagatgatgtggagtactatattgactcatcgcaagatccagactttgag
gagaatgagtttctatacgatgacctggacttggaggaaataccggcaaccttaatggcg
acatcccctcagagccatatggaagatgagatgtttcttcagtccagcagcaccccgaac
tccaccacttcctcttcccccatcccaccatctcctgccacaggcactatggagaattca
gatgataaacgaggtcgatccacagacagtgaagtcagtcagtctccagtgaaaaacggc
aacctgtctctttcgtccttctcctcatccacctcctctggctcctcctcctcttcttct
ctggtctccatggctactgttgtcggaggctgcacggcggtctccgggggcagcagcctg
ctgggaagctttagcagtgcagtgcagcagcatcctcctcagtctcaacagcaaacacag
gtcaaactttcctccacatctgcaccttccaacaacacgccgagcccacctagccactcc
acgctacctgcctccacttcttcctctctgcccagttccagcacacctggccaagttact
tccaattcccagtcccaggcttcaacagggtctggggctgggggctccagccatggacta
ggtttgggcctggggaaaggaggtgtgacggtgtccagcagcagtagtgtgggtcagata
ccaggtctgggtctgacaggaatatctggttctctcaacaccatggcagggcttctctca
ggctctacccctgccccttatgctcaggcggctgctggtggaacagcaagtaatgcctct
agtggtccggtggggagtagcagcagcagtagttctggcatatctgcaccaagtggagtt
gccggggtagtgagcatagttgcaaccagtaacggtacgggtacaggggcaggtatgggt
ctattagggtccagtccgggtcatggagctttaagcggaggtattctgaacctggtaccc
gggcagacagctcttcaggggtctacacctgtgagtcctgttggcacagcacctggtgga
ggaaccggcgagagtggattggggggcaatgggagcagtgcagtgggaagtggaggtgta
gggacaagtgtagcacctgcgagaccccccagctgcctcaaacaaaatggagcaaccagt
tacagtgctgtggttgcagacaacacaccagactcctccctcagcagtgccagccaatca
caaaacagccattcctcttcctcaagctcatcaacaaatcaaactctggataatggtctc
agtttattgagttctatcactctacccccctcctctccatcacctgctttcactgacagc
acacctggtggtgggagtctgctaaacggcccacactcctatacaccaaacacagacgcc
atcaaggctcctgagccaccgagctctctgaaagcaatggcagagagagctgcactggga
ttggcactagatggagaaatcccatcactgcacctcacagatcgagatctgttctcgggg
tcctctgccccacctggtcccacaacggtcccccagcctgctgtttcagaggtcaacctc
ccaccatctttaggggcatgtccattaggccccactcccctcacgaaagagcagctctac
cagcaggccatgcaagaggcagcatggacacatatgccccacccttctgattcagaaaga
atcaggcaatacctgatgagaaacccctgtcctacaccaccattccaccaccaagtgccc
ccacatcattcggactctattgaattctaccagagattgtctactgaaactctcttcttc
atattctactacctggagggcacaaaggcgcagtatctgtcagcaaaagcactgaaaaag
caatcctggaggtttcacaccaagtacatgatgtggttccaacggcacgaggaacccaag
accatcactgatgagtttgaacagggcacgtacatttactttgactatgaaaagtggggc
cagagaaaaaaggaaggatttacgtttgagtacagatacctggaggacagagacctacag
tga
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