Myxocyprinus asiaticus (Chinese sucker): 127454579
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Entry
127454579 CDS
T08782
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127454579
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
masi03310
]
127454579
Transcription factors [BR:
masi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127454579
Nuclear receptors [BR:
masi03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127454579
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127454579
NCBI-ProteinID:
XP_051577830
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Position
16:33728570..33775362
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AA seq
497 aa
AA seq
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MENDEPQSPDPSQDNSQTIRAQIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSQSSSV
QYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRNAVKFGRMSKRQRDSLFAEVERHRQ
QQRLQCNSVLEPQTLPAYRPGKEPREQSSHLIPTLPPAYPYSVEPKLPGCPPEVHPYLEC
CIGEAQAPDLACRVSHRRSESNSPTVGRGFDSTRSTPEAILNMPCSEMGFRSFDPESLFF
GYPTSLHIEELCASIVRSHRETTHYHPEELQTLRWKVFSRVEIHAYQSKSVDEMWQHCAV
RLTDAVQYVVEFAKRIPGFRQLCQNDQITLLKSGSMEVVLVRMSRMFNMENNTVFFDGKF
AGTELFKSLACSDLIAAVFDFAHNLCALRLTEQQMAVFSALVLINADRLYLEDRERVQRV
SRDVKLALSHILHRDNQESLLLKLYQRVPVLKSLCAQHIEKLRWFRQLYPLTVHSLFPPL
YKELFGFDTDIQTLATH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgacgaaccccaatcaccggacccgagccaagacaactctcagacaataaga
gctcagatagaggtgatcccatgtaagatctgtggagataagtcatcaggtgttcattat
ggagttatcacttgtgagggttgcaaggggttcttccgcagaagtcagtcctccagtgtg
cagtattcatgctccaggcagagtaactgtcccatcgaccgcgccagccgcaaccgctgc
cagagctgccgcctcaaaaaatgtgtggctcagggcatgagccgcaacgctgtaaagttt
ggtcgcatgtccaagcgtcagagagactcgctgtttgcagaagttgagagacaccggcaa
caacagcgtcttcagtgcaactcggttctagaaccccagactctaccagcctaccggccc
ggcaaagagcccagagaacagtcatcacaccttattcctactctgcctccagcctacccc
tattctgtggagcccaaactgccaggatgcccaccagaggtgcatccatacctggagtgt
tgcataggtgaggctcaggctcctgatctggcctgcagggtttcccacaggaggagtgag
agcaatagcccgacagttgggagagggtttgactccactaggtcaacaccagaagccatc
ctaaacatgccatgcagtgaaatggggtttcgatcttttgacccagagagcttgttcttt
ggctacccaacttctctccacattgaggagctctgtgcgagtattgtgcgttcccacaga
gagacaactcattatcatccagaggagctgcagactctcagatggaaggttttcagcagg
gtggagatccatgcttaccagagcaagtcagtggatgaaatgtggcagcactgtgcggtg
cggttgactgatgccgttcagtacgtggtggaatttgctaaacgtattccaggattccgt
cagctctgtcagaatgatcaaatcactctgctcaagagtgggtccatggaagtggttctg
gtccggatgagtcggatgtttaacatggaaaacaacacagtattctttgatggcaaattt
gctggaacagaacttttcaaatctcttgcatgtagtgatcttatagctgctgtatttgac
ttcgctcacaatttatgtgcgctgagactgactgaacagcagatggcggtgtttagcgca
cttgtcctcatcaacgcagatcggctgtatctggaagacagagagagagtgcagagagta
agcagagatgtgaagcttgccctgagtcacattctgcacagagacaatcaggagagtcta
ctgcttaagctgtaccagagggtgccggtgttgaagtctctgtgtgcgcagcatattgag
aaactgcggtggtttcgtcagctgtacccactcactgtgcattccctcttccctccgctg
tacaaagagctgtttggctttgacacagatatacagacactggctactcactaa
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