Myxocyprinus asiaticus (Chinese sucker): 127454933
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Entry
127454933 CDS
T08782
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127454933
03015 mRNA surveillance pathway
127454933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127454933
03041 Spliceosome [BR:
masi03041
]
127454933
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127454933
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127454933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
127454933
NCBI-ProteinID:
XP_051578434
LinkDB
All DBs
Position
17:complement(29984455..30003960)
Genome browser
AA seq
954 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFVFNQLEEKNPDAKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDEDKREKESKERAQSKSPKRRKSRSPPRRERKA
SPPHSPRRKPSPVVLPSISPPNNKEEPKQEPDQSESSKPEPLIQEASSTSDVVGEIKPDS
MSEAVKESSPEKTSKSEDKPKPRDRDRDKDGRRDRPRHRSRSRSPRRRPRSRSRSFSPRR
RSSPRRRISPRRRSPPRRQPPSRHRRSRSPVRRRRSRSRFSSGSSSSRSPHKRAGKRVSA
TPPRKLLRRSDPSSPSRRRGHSPSGPDTSPSAAKHRPGGRNTSRSPPKPRRSDASESEEE
KVGKESTADSVQQRRQYRRQNQQSSSDSGSSSSSEDEGPRRQKRGAAARNGDVRRRRSHS
PASPRRRQRDASPRKRHSPSTGGRRHRSPSPRRRRSPSPPRRRSPSPPPRRHSPAIQRRY
SPSPVSAQKRRTSGSPLPKHRGSPSPVPRRRRSPSPVGKRRRSPSPVGKRRRSPSPVGKR
RGSPSPVGRRRGSPSPVGRRRGSPSPVGRRRGSPSPVGRRRGSPSPVGRRRGSPSPVGRR
RGSPSPVGRRRGSPSPVARPRGSPSPVGKRRRSPSPLAKRRSSRSPKRSRVSSPGKRRTP
PSSTSPPPRHSRSSPNPSAAQRGRDNRFSPPTHALRVSSSPQGRFAPSGSPPQRQRRQTS
PSHDTRPIRRVSRTPEPRKSQRGSQSPQPVRRQVSRSPSASPPLVAHKRPASVSPSRSAS
RSPLPPSKKNSSVSPSPNKNSDVEAGKKKKKKKEKKHKKEKKHKKHKKQKKEKGGEEKSG
GVAGEHGREVEPDSDQKKESESEVEDSLDDLEKHLREKALRSMRKAQLSPSSQS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggtttttccgcggcaccagtgcggagcaggataaccgcttcagcaacaaa
cataagaagctgttgaagcagctgaagtttgcagaatgtctagagaagaaggtggatatg
accaaagtcaacctggaagtcatcaagccctggatcacccagcgtgtgacagagatcctt
ggcttcgaggatgatgtcgtcatagaatttgtcttcaaccagctagaggaaaagaatcca
gatgcgaagatgatgcagattaatttgactgggttcctgaatggaaagaacgcccgggag
ttcatgaaggacctctggccgctcttgctaagtgctcaggagaacattgctggtatccca
tctgcctttctggagcagaagaaagaggagatcaaacaaagacagatcgaacaggagaaa
cttgcttctctgaaaaagatagatgaagataaaagggagaaggagagcaaggaaagagct
cagtccaaaagccctaaacggaggaagtcccgctcccctccgaggcgtgaacgtaaagcc
agtccccctcactctcctcgccgaaaaccaagtccagtggtcttgccttctatcagtcca
cccaataataaagaagaaccaaagcaagaaccggaccaatcagagagctccaaaccagaa
cccctcatccaggaggcttcctctaccagtgatgtggtgggtgagataaagccagactcc
atgtctgaggctgtgaaagagtcgtctccagaaaaaacgtcaaaatcagaggacaagccc
aaaccaagagacagggaccgagacaaggatggacgcagagatagaccacgccaccgttct
cgttcccgatcacctcgcaggcgacccagatcccgctccaggtcgttctctccacgccgc
agatcgagtcccaggagacgaatctctccaagacgcaggagcccccctagacgccagcct
ccatctagacatcgacgcagccgttcacctgtccgaaggcggcgctctcgctcccgattc
tcctcaggcagttcctcgtctcgttccccccataagagagcaggtaaacgtgtgtcagcc
accccgcccagaaaacttctacgccgctcggacccttccagcccctccagaagacgaggc
cacagcccatctggaccggacaccagcccttcagctgcgaaacacagacctggtggaagg
aacacctctcgctctcctcctaaaccgagacgatccgatgcatcagagtctgaggaggag
aaggtgggcaaagagtcaacggcagattctgtccagcagcgacgtcagtatcgcagacag
aatcagcagtcgtcttcagactctggttcatcctcttcttcagaagatgaaggtccaagg
cggcagaaaaggggtgcagctgccagaaatggagatgtcaggaggcggcggagccattca
cctgcatcaccacggaggcggcaaagagatgcatccccaagaaagagacattctccatca
actggtggtcgtagacatcgctctccttctcctcgccgccgcaggtcgccctctcctcca
agacgcagatctccatctccacctccccgacgccactctcccgctattcagcgtcgttac
agcccctcccctgtctcagctcagaaaagacgcacatcagggtctccccttcctaagcac
agagggtctccttcacctgtgcccagacgcagacggtctccgtcccctgtgggcaagcgc
agacggtctccgtcccctgtgggcaagcgcagacggtctccgtcccctgtgggcaagcgc
agagggtctccgtcccctgtgggcaggcgcagagggtctccgtcccctgtgggcaggcgc
agagggtctccgtcccctgtgggcaggcgcagagggtctccgtccccggtgggcaggcgc
agaggctctccgtccccggtgggcaggcgcagagggtctccgtccccggtgggcaggcgc
agaggctctccgtccccggtgggcaggcgcagaggctctccgtccccggtggccaggccc
agaggatctccctcccctgtgggcaagcgcagaagatctccctcacctttggccaaacgt
cgctcctctcgttcccccaaacggagtcgtgttagcagtccaggaaagagacgcactcca
ccctcttctacttcacctccaccccgccactctagaagttctccaaatccctctgcagca
caacggggccgtgacaaccgcttctctccccctacccatgctcttcgggtgtcttccagt
cctcagggtcgatttgccccctctggttcacctccgcagagacaaagacgtcaaacgtcc
ccgtctcacgatacgagacccattcgtagggtttcacgcacaccagaacctcgcaaatct
cagagaggttctcagagcccccagccggtaaggaggcaggtttctcgatcaccatctgct
tctcctcctctggtggctcacaagcgacctgcttcagtttctccctctcgctctgctagc
cgctccccacttccaccttccaaaaagaacagcagtgtctccccatcgccaaacaagaac
tctgatgtagaagctggtaagaaaaagaaaaagaagaaagagaagaaacacaagaaagag
aaaaaacacaagaaacataaaaaacagaagaaggagaagggtggagaagagaagagtgga
ggggtggcaggagaacatggacgggaagtggagccagactctgaccagaaaaaggaatca
gaaagtgaagtagaagacagtttggatgatctggagaagcatctgcgtgagaaagctctc
cgctccatgaggaaggcccagctgtctccatcatctcagtcctga
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