Myxocyprinus asiaticus (Chinese sucker): 127455301
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Entry
127455301 CDS
T08782
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127455301
03015 mRNA surveillance pathway
127455301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127455301
03041 Spliceosome [BR:
masi03041
]
127455301
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127455301
Spliceosome [BR:
masi03041
]
Complex C
Other components
EJC/TREX
127455301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
127455301
NCBI-ProteinID:
XP_051579039
LinkDB
All DBs
Position
17:complement(41652095..41657468)
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AA seq
667 aa
AA seq
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MAVVVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQNRRLTIPGPGGGRGRGINL
LRRGLSDSGGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESTVSTEKLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNTKLIKFIRTKTKP
PIFYLPGRMCSATQKLMEESQKKLNGMFDERREAFAEHLNKMEARPRRQSQRTGDKEMED
SRRAEEMKTEDQEEGKAVVGPTGNRHDVEMEDDEEDIVEEEGEESSEIREREGDQEQGEE
KDKQEESERKADEEEEDEDVGAVEVKEYEEEQMEVTEVQREAEGQGKLQVESPQATVEEV
GSEKREEEQETEKESQEEIITDSQQTPESHVETEVAECKEPELEAPAPSAEENVTKGDDH
AQESQPSPPEPVPNPEVPSQEQSQEPTVQPQEAKADTKEAAEDVNDSRARTKARAKRSKS
RSSSSSSSSSSSSSSSSGSSSSSSGSSSRSSSSGSSSSSSSSRSHSRGRDRDARDRKRRR
RLSDRERRKSGSERGHKSSKGSGRDIKGSKDKSSKPDRKMTSSEGSRSGRRSSRNERDRK
SNRKDRR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtcgtgcgaagtttgcaggaccagctggaaaaagccaaggaaagcttaaaa
agcgtggacgaaaatattcgaaaactaaccggcagagatccgagtgaattaagaccgggt
caaaacaggaggctaaccatcccaggcccaggtggaggtaggggacgtggaatcaacttg
ctgaggcgtggactctcagacagtggtggaggacccccagccaaacagagggacatcgaa
ggggcactcttgaggctggcaggggatcagcgagccaggagagattcacgccatgacagc
gacgctgaggatgatgacgatgtcaaaaaaccagcgttgcagtcatctgttgttgctacc
tccaaagaacgtacgcgccgtgatcttattcaagatcagaccatggatgagagagggaag
caaagaaatcggcgcatgtttggcctgttgatgggaactttgcagaagtttaaacaggag
tctacggtgtccacagagaagttaaaaagacggcaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagaaaga
cgtgccaaacaaactgagctacgacttctagagcacaaagttgagcttgctcaactgcaa
gaggagtggaatgcgcacaatactaaacttatcaagttcattcgcacaaagaccaagccc
cctatcttttacctacctggtcgaatgtgctcagctactcaaaaactcatggaagagtct
cagaaaaaattaaatggcatgtttgatgagagacgtgaagcctttgcagagcatctcaac
aaaatggaggctcggccaaggcgtcaatcccagcgtacgggtgacaaggaaatggaggac
agccgtcgggctgaagagatgaagacagaagatcaagaggagggtaaggctgtagtaggg
ccgacaggtaacagacatgatgtggagatggaggatgacgaggaagatatagtcgaggag
gaaggtgaggaaagctcagagattagggagagggagggagatcaggagcagggggaggag
aaggataaacaagaggagagtgagaggaaggcagatgaggaagaagaggatgaagatgtg
ggagcagttgaggttaaggaatacgaggaggaacagatggaggtcacggaagttcagagg
gaggctgagggacagggtaagttgcaggttgagagtccacaggccacagttgaagaggta
ggtagtgagaaaagggaggaagaacaggagacagagaaggagtctcaggaggaaatcata
acagactctcagcaaaccccggaaagccatgtagaaactgaggttgcagagtgtaaagaa
ccagaacttgaagccccagcacctagtgcagaggaaaatgtcactaaaggggatgaccat
gctcaagagtcccaaccatcaccgcctgaacctgtaccaaatccagaagtcccatctcaa
gagcagagccaagaaccaacagttcagccacaagaagccaaggcagacacaaaggaggct
gctgaggatgttaatgactctcgtgctaggaccaaagcaagagccaagaggagcaagagt
cgaagtagcagtagctcctcttccagttcctcttcaagttcctcctcaagtggatccagc
tcctcctctagtggctccagcagccgaagcagttcttctggctcctcgtcgtcttcctcc
agctcacgctctcacagccgcggcagggatagagatgcccgagaccgcaaacgccgcagg
agactatctgaccgggagcgtaggaaaagcggaagcgagagaggacacaagtcctccaaa
ggcagtggccgtgacattaaaggctccaaagacaagagctctaaacccgacaggaagatg
acgagttcagaaggaagcaggtcagggaggaggtcctccaggaatgagagggatcgcaag
tctaatagaaaggatcgacgctga
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