Myxocyprinus asiaticus (Chinese sucker): 127455722
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Entry
127455722 CDS
T08782
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127455722
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127455722
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
127455722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
XAF1_C
AAA_16
Motif
Other DBs
NCBI-GeneID:
127455722
NCBI-ProteinID:
XP_051579758
LinkDB
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Position
18:complement(35617048..35639414)
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AA seq
1150 aa
AA seq
DB search
MSKEQEKSRRWDWDSPQCRAQLDEIFFRQHDYIQTGSAEHKDFWSFFERFQRFKAKRDMT
GSKSSKTESHEGKSRKKPGSVDLGLPKDYDARYRINISVCSKDVEERLGGSDHRRRRETS
GPGRQEVTDCRIALLHFLDFNQKQSFNKLAKLKREQKCLPIFQYRDRIVEMVRTHPVVVV
AGDTGCGKSTQVPQYLLASGFNHIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFE
SSRTTATKLLFLTEGLLLRQIQQDATLGQYQVLIVDEVHERHLHCDFLLGVLRSLLALRP
DLRLVLMSATINIKLFSSYFNSAPVLQVPGRLFPIQVIYQPIPQEEQVSRSEKLDPRPYL
RVLQGIDQRYPPEERGDLLLFLSGVAEISTIQEACQTYGTHTKRWIVLPLHSTLSLAQQD
KVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKSKMQRLQEFWISRA
SSEQRKGRAGRTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSLVLQMKSMDLGDPCTF
TFIDPPPASSIQTAVTYLRDQGALDEHGELTPIGRLLAQLPVDVVIGKMLVLGSVFNLVE
PVLTVAAALSVQSPFLRSAQHNPDCSTARQPLNNNQGDPFTLLNTFNAWVQVKGDRGSGS
RKWCRRRGLEEQRLYEMVNLRRQFKELLRSHGLLEADPGGRAKPQDRARRRERLTERQKL
HQLKRDHELQENTKRKVLRLEEGLEEDGSSGSDGEGAGSSKKDKDKAGQTVDIQEVKFKL
RHNVNELQEAAYASAELSSRKQALLKLVLCRGLYPQLAIPDEHNATRKDSEQVFHTRNKL
GVVIHPTSVFASDPEALHVPEHESSEFGADKGQSNRHQLLAFVTLLETNKPYVSNCVRIP
ALQALLLVANSVDTNADCTRVVVDGWLELGLTDGEMALKVLSSALTLRGEWERLLQSQLS
QGGPGSTAGVGLGGPKTSRREMEKLCEGLVRFLLYTEVTYSLSRLSALQSQNLYIGPQQD
SDLSSASALGSLFPGMKAEPDPIKGGLRLCRYFTYNCLCDSKDLYSECLRTFWSCPHCDL
YMPLTPLERMQHQATCRPLEEQQPEEESDSVKTSSSSSSGLTRVYHCDICNKDLTLTSTE
ILKHKRQHLS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagcaggagaagagccggcgctgggactgggacagtcctcagtgtcgagcc
cagctggatgagatctttttccgccagcatgattacatccagacgggcagcgctgaacac
aaggacttctggagcttctttgagcgctttcagaggttcaaagccaagagagacatgaca
ggatcaaaatccagtaagacagaatcacatgaggggaaatccagaaagaaaccaggatct
gtggatctggggctcccgaaggactatgatgccaggtacagaatcaacatctcagtgtgc
tccaaagatgtggaggagcgcctcggaggatctgatcacaggaggcgcagagagacctca
ggtcctggcaggcaggaggtcacagactgccgcatcgctctcctccatttcctagatttc
aaccaaaagcaaagtttcaataagcttgctaagctgaaaagggagcagaagtgtctgccc
atcttccagtaccgtgacagaattgtggagatggtgaggactcaccctgtggtggtggtg
gctggagacacgggatgtggaaagtccacgcaggtgccccagtacctgctggcatcaggg
ttcaaccatatagcctgcactcaaccacgccgtattgcctgcatctcgctggccaagaga
gtgagctttgagagcctcaaccagtatggctccaaggttgggtaccagatccgctttgag
agcagccgcaccacggctaccaaactcctgttcctgaccgagggtcttctgctcaggcag
atccagcaggatgctactttgggacaataccaggtgctgatcgtggatgaggtgcatgag
agacacctgcattgtgacttcctgctgggagtgttgcgttcccttctggccctgcgccca
gacctgcggctggttcttatgtcggccaccatcaacatcaagctcttctccagttacttc
aacagcgcacctgttctgcaggtccctggcagactctttcctatacaggtaatctaccag
cccattcctcaagaagagcaggtgtcccgctctgagaagctagacccacggccgtatttg
cgtgtgctgcagggtattgaccagcggtatccaccagaggagaggggtgacctgctgctc
ttcctcagtggagtggccgagatctccaccatccaggaggcctgccagacttacggcaca
cacacaaaacgctggatcgtccttcctttgcacagcacgctctcgctagcccagcaggat
aaggtgtttgacattgctcccccgggtgtaagaaaatgcataatttccaccaacattgct
gagacctcagtcactatcgatggagtgcgctttgtggtcgattcaggtaaagtgaaagag
atgagttttgacccaaagtcaaagatgcagagactgcaggagttctggatcagcagagcc
agttcagaacagagaaaaggacgtgcgggaagaaccggtccgggagtctgttaccgactc
tactctgaatcagattatgatgcctttgccccctatcctgttcctgagatccacagggtg
gcgctggactccctcgtgctgcagatgaagagtatggatcttggagacccttgcactttc
acctttatagaccctcctcccgcctccagtattcagactgcagtgacatatctgcgagac
cagggggcgctagatgagcacggagaactcactcccattggcagattgctggcgcagttg
cctgtggatgtggtcattggaaaaatgttggttttgggttcagtctttaacctggtggag
ccagtgttaactgttgccgctgcgttgagtgttcagtctccgttcctgcgcagtgctcag
cacaaccctgactgttcaactgctcgccaacccctgaacaacaaccaaggagaccccttt
acactgctcaacacctttaatgcctgggtgcaggtgaaaggagacagaggaagtggctcc
aggaagtggtgcagaaggagagggctggaggaacagaggctatacgagatggtcaacctt
agacgacagtttaaagaactgctgcggagtcatggtctgctggaggctgatccgggcggt
agggcgaaaccgcaggatcgagccaggcgcagagagagactgacagagaggcagaagctg
caccagcttaaacgtgatcatgagctccaggagaacaccaagaggaaagttctacgtctg
gaggaggggctggaggaagatggctcatctgggtctgatggggagggagcaggttcgagc
aaaaaggacaaagacaaagctggacagactgtcgacatacaggaggtgaagttcaagttg
cgtcacaatgtaaatgagctgcaggaagctgcatatgccagtgcagagctgtcatcacgg
aagcaggctctgctcaaactggtgctgtgccgtggtctttacccacagctggccatacca
gatgaacataacgcaacccgcaaagactccgaacaggtgttccacacgcgaaataagcta
ggtgttgtgatccaccctaccagcgtgtttgccagtgacccggaagctctgcatgtccct
gagcatgagtccagcgagtttggtgctgataaagggcagagcaataggcaccagttgcta
gcctttgttactctactagaaacaaacaaaccttatgtttcaaactgtgttcggattcca
gcactgcaggccctgcttctggtggccaactctgtggacactaatgcagactgcacgcgt
gtggtggtggatggctggttggagctggggttgactgacggagagatggccctaaaggtt
ctctcctctgctctcactctgcggggggaatgggagaggctacttcagtcccagctgagc
cagggtggtccaggttccacagctggggttgggctggggggacccaaaacatcccgcagg
gagatggagaagctctgtgagggacttgtgcgatttctgctgtatactgaggttacttac
agtctgagccgtttatcagcactgcagtctcagaacctgtacatcggaccccagcaggac
tcagatctctcctctgcttcagcacttggttctctgttcccgggcatgaaggcagagcca
gatcccattaaaggaggcctgcgcttatgtcgctacttcacctacaactgtctgtgtgac
tctaaggacctgtacagtgaatgtctgcgaactttttggagctgccctcactgtgacctg
tacatgcccctgacgcccttggagcgcatgcagcatcaggccacctgcagaccactggag
gaacagcagcctgaggaagagtctgacagcgtaaagacttcttcatcgtcttcatctggt
ctgaccagggtctaccactgtgacatctgtaataaagacctgactctcacctcaacagag
atcctaaaacacaaacgtcagcacctgtcgtga
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