Myxocyprinus asiaticus (Chinese sucker): 127455883
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Entry
127455883 CDS
T08782
Name
(RefSeq) DNA-binding protein SMUBP-2-like isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masi03009
]
127455883
03012 Translation factors [BR:
masi03012
]
127455883
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127455883
5.6.2.5 RNA 5'-3' helicase
127455883
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
Other ribosome biogenesis factors
127455883
Translation factors [BR:
masi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127455883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
Viral_helicase1
zf-AN1
DEAD
ResIII
UvrD-helicase
Helicase_RecD
nSTAND3
AAA_22
SLFN-g3_helicase
AAA_16
Flavi_DEAD
PhoH
T2SSE
Herpes_ori_bp
SRP54
ABC_tran
AAA_33
AAA_25
AAA_31
NPHP3_N
IstB_IS21
Zot
UvrD_C_2
ATPase
AAA_7
AAA_5
GCR1_C
Mg_chelatase
NTPase_1
AAA
MAP3K_TRAF_bd
AAA_18
Motif
Other DBs
NCBI-GeneID:
127455883
NCBI-ProteinID:
XP_051580007
LinkDB
All DBs
Position
18:25149375..25162532
Genome browser
AA seq
991 aa
AA seq
DB search
MEVENFVSKTIELLQEEREAEVEETRAWQENLSPKNLQNKGVYLLKLQVGSQRTGMYGRL
LVVFEPRKSIGPSVLPSNTFGPGDIIGLYQSEGQGQSSQLGSGVVTRVTQTSLTVAFDDT
QDGINVDRDGLYNLMKLANDVTYRRLTTALNSLNGYSSGPASYLISVLFGYSEPGTLSHQ
NVLEFSNVGLDNSQKEAVSFAISQKDVAIIHGPPGTGKTTTVVEVILQAVKQEQKVLCCA
PSNVAVDNLVERLAKNKVKVLRLGHPARLLESIQKHSLDAVLAHSDNTNVISDIRKDMDK
AFSEMKKARDKGQRSNLRREIKELRRELRSREETAISQILKRADVILATNTGASDDGPLK
HLPNDHFDLVVIDECAQALESSCWIALLKARKCILAGDYKQLPPTIKSQSAASKGLSVSL
MERLIKKYGDSVVRMLTTQYRMNSAIMQWASEQMYQGKLIAHPSVEKHLLRDLSGVVDVE
ETRIPLLLIDTAGCGLNEMEDTDEQSKGNQGEVDIVALHIKALTEAGVQVRDIAIIAPYN
LQVDLLRQKLSHKHTELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT
RARRQLVVVCDSQTVRNHDFLKSLVDYITEHGEVRTAFEYLEDCVPQNYNRDSKDKQPNS
KDISSTKQKPKNQAKKADQEHKKSADNKSRGEGQPNVHSHQNKYANHSKPKDADQTQNKR
KAIKEQILNFLKDSNKTELQFPSSLNSHERLMVHEISEEMGLRHESQGEGKNRCITVVQT
LPGPENLVKEQEPKQPSTAVELLEEESQKKPSQPTVDLKILHLERMRREQEKREEKKKQS
MRPEPDLNTSKGQSFKKSKGKAKIKAAATDIAAAATADDDFDTLIDAVVKAERVCGFVKC
KASVLTLGQLCIFCKRQYCLSHHIPEVHGCGDKAKAQARMRISKEGVLYAGSGEKDKSID
PNKKAYLQRKLDSKLKDMATQRKTKAKDKEH
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaaaacttcgtttccaaaacaattgagctccttcaagaagaaagagaagct
gaggttgaagaaaccagagcatggcaggagaatttatctcccaagaatctacagaacaaa
ggagtgtacctgctgaaacttcaggtcggaagtcagcgtactggcatgtatggcagactt
ctagttgtttttgaacccaggaaaagtataggaccctcagttcttcccagcaacaccttt
ggacctggtgatataataggtttatatcaatccgagggtcagggtcagtcatctcaactg
ggctcaggtgtagtgacacgtgttactcaaacgtccttgacagtggcttttgatgacaca
caagatggtattaacgtggacagagatggactctataatcttatgaagttggcaaatgat
gtgacctacaggcgactgacaactgccttaaactctttaaatggatacagcagtggtccc
gcgtcttacctgatcagtgtcctctttggttactcagaaccagggacattatcacatcaa
aatgtattggaatttagcaacgtcgggttagataattctcagaaggaggctgtgtccttt
gcaatttctcaaaaagatgttgcaatcatacacgggccaccgggaactggcaaaaccaca
acagtggttgaagtaatcctgcaggcagtaaagcaagaacaaaaggtcctttgctgtgct
ccttccaatgtggccgttgataatttggtggagcgcctggcaaagaacaaggtcaaggtt
ttgagattgggtcacccagcccgtctgcttgagtcaattcagaaacattcactggatgct
gtacttgcacacagtgacaacactaatgtcatctctgatattcgcaaggacatggacaaa
gcttttagtgaaatgaagaaggcccgtgacaaaggccaacggagcaacctgagaagggaa
atcaaggaattgcggcgagaactgaggtcaagggaggaaacggctatcagtcaaatcctg
aagagagctgatgttattctagctactaatactggagcttctgatgatggtcctctgaaa
catcttcctaatgatcactttgacctagtggtgatagatgagtgtgctcaggctctagag
agcagctgttggattgctctgctcaaagcacgcaagtgcatactagctggggattacaaa
cagctgccacccaccatcaaatcacagagtgctgcatctaaaggcctgtctgtgagttta
atggagaggctgattaagaaatacggagactcagtggttcgaatgctaactactcagtat
cgtatgaacagtgccatcatgcagtgggcttcagagcagatgtaccagggcaaactgatc
gcacacccttcagtggagaaacacttgcttagagacctgtctggtgttgttgatgttgag
gagaccagaattcctcttctgctcattgacactgcaggctgtggccttaatgaaatggag
gacacagatgagcagtctaaaggcaatcaaggagaagtagacattgtggctcttcatata
aaagctcttactgaggctggagttcaagtcagagacattgcgattattgcaccctataat
ctccaggtggatcttttgagacagaaactgtcccataaacatactgagttggagatcaag
tctgtggatggcttccagggcagagagaaggaggcagtggtgttgtcattggtcagatcc
aacagaaagggtgaagttggatttcttgctgaagacagaaggatcaatgtggctgtgaca
cgtgccagacgccagctcgtagtagtgtgtgattctcaaactgttcgaaaccatgatttc
ctcaaatccttagtggactacataactgaacacggggaagttcggactgcctttgaatac
ctggaagactgtgtaccacagaattacaaccgtgactcaaaagacaaacagcccaacagc
aaagatatttcatccacaaaacagaagcccaagaaccaggccaagaaagcagatcaagaa
cataagaaaagtgctgacaacaaaagcagaggagagggtcaacccaatgttcattcccat
caaaacaaatacgccaaccattctaaacccaaagatgctgatcagacccaaaataaaaga
aaagctataaaggagcagatattgaactttctgaaggactcaaacaagacagagctacag
tttccttcctcgctgaattcccacgagcgcctgatggtccatgagatctctgaagaaatg
ggattgaggcatgaaagccagggagaagggaaaaaccgctgtatcactgtggtccagact
ctgccaggaccagaaaatctggtgaaggagcaagagcccaaacaaccaagtactgctgtg
gagctacttgaagaagaatcacagaagaaaccttcacagcccactgttgatttgaaaatc
ttgcatttggagcgtatgcgtcgggagcaggaaaaacgagaagaaaaaaaaaagcagagt
atgagaccagagccagatctcaataccagcaaaggccagtcttttaagaagtccaaagga
aaggctaagataaaagcagcagcaacggacatagctgctgctgccacggcagatgatgat
tttgacactcttatcgatgctgtagttaaggcagagcgagtgtgtggctttgtgaaatgc
aaagccagtgttctcacactgggacagctctgcatcttctgcaaaagacaatactgtctg
agtcaccatatacctgaggttcacggatgtggagacaaagcaaaagctcaggctagaatg
aggataagtaaagaaggagtgctctatgctggaagcggagagaaggacaagtcgatagat
ccaaataaaaaagcatatctgcagagaaaactggactccaaactcaaagatatggcaact
caaaggaaaaccaaagcaaaggacaaagaacattga
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