Myxocyprinus asiaticus (Chinese sucker): 127455987
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Entry
127455987 CDS
T08782
Name
(RefSeq) protein NLRC5-like isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
masi04054
]
127455987
Pattern recognition receptors [BR:
masi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127455987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_14
HSF_DNA-bind
Atypical_Card
LRR_8
Motif
Other DBs
NCBI-GeneID:
127455987
NCBI-ProteinID:
XP_051580188
LinkDB
All DBs
Position
18:complement(27498973..27573276)
Genome browser
AA seq
1792 aa
AA seq
DB search
MRMEMVDWQGGIQELVAQESSAMVDLLCEQNSKVLDHIFSLVDPRTQHQLRSLTKIRDRV
SGIVNYFKNSDRIICEEFLQNVYEYCENIPFPLETTLLSIAGYASGTNFNHSGDTDNSSP
TRNVKRPRLDYLQSYKDALKSMLLQKHETVTQAVVKDIRLNETWVYLKHRHPLRGKDRTT
QPQASLGNQEGEDASFEHKVSVGSLLKTTGKVFMLLGQAGSGKTLLVHCLGHSWAEDSFS
SIDLLFLLEFRQLNLISRNLSLKELIFLFYPPCEEAEDQSEAVFSFILSNPEKVCFIFDG
YDEFRAKLTDPKKLDGIIDTYKPLPVTDLLSALCNRKILPNCTVLVTCRPRDVTDMFGSH
GFITCELIGFDRLGVKEYTEQYFHEKGDEFKEKAVNLLMDSHHLLSMSHVPGLCHICCVC
VDYMFSISGTHASLQLPVSLTQIYIQILFAFLSRFNGEGMSSASLMQRYRTKIAEMSQLA
LKGLEGSCIVFTAAEVSTELQDFGVRTGILSRVNLTCEDGSSGYGFTFMHLTMQEFLAAL
HLMTSQSITESHLKKKLNLKTRWTTKIDPKSVFTDSLHLYVCGLAAEACTSCLVQLKGTE
EVRTWVQVRQAAVRGILFALAGNASQTGPKIVELCRCAQETQDAKLARAIGSRPRFELRN
IRLSAVDMEALAFVTAAADQTVCLDFGGCSIDLDCLEILPCFKNVDHLIFRSRKYDDKFA
EALCGILSKLQALRRLEFISGGLTDVGAAQLARALEDCTHITHLNVSDNSLKDEGIGQIV
KTLSKLPNICSILMDKSSISTDGILMLTEKMAVCPSIQKVYVEGSKDVRISFSQTSDTIS
ERVVLNNKEEAKNVTLKQCYFTCTNVASLCNKLKGYSFLTVLDLSKNSLGNKGLKKLMDL
LPKLGIIQEINISENGVNMDGLVLLASALCTQKDLMKVDASENGKKTLVLWFDTSGRHSK
QLTPKETGLHLHKKLSLTHSNIQPTYMTKLCKQLVKCKNLLDIEFSHLKLSNESVKNLIL
ILPEMSSLQLLNLSHVDMSTNGALLLVRSLADCQRVTAVELRHQAEAFIKFVPVKAEAAI
CKLTEYKLSRTNVEKLSMILEGCPHLAELDLSHNLLKDEGVKCFVDCLPKLKISRSVSLN
GNRMTQVGALHLVNSMNTCEKVVSVEVSLGVEDQSLIQFVQKHVNGKTIRLRECSFEANH
LQKLVEILNRCPRLLTLELSSSSLHNQGLFSLLNSLAKLSSIQTVKLRNNGLSSEQIGYF
VKQLSNYRQHRDIWIEELWMTGGAVVSLVGNCLKLEPHIREMRVNNSSINIIMEANSSFS
FNSISHSEIRELSLCTLRSISFGDCDIEGHHLTPLTLPIQKCHALQDLKFSQLKMDRKGA
EFFSLVIPSLLNLRNLILDLKGAAEDDLIILMEALPNNQTFESLSLSQLILGDRGTTVLA
RVLKKVPNLRSLNLSQCSGWTAARGRELFIGLVQCFSLEEIRLDSVVLDEEGINILAQGF
CTMGSLRRLSLNNIRVETCTGILCLLTSFQAFRQMEEIELDGMRMGDSGTHELLKHIPSW
TELRKISLSDNSVSDQAGEKLVEALSHCRALQQLQLSKNQLGEASAAKLTQVLPLLSQLS
DLDLSENQFGPKGCLILCEGLVNKTALKRLHLTSIGSSDLVGVATTLICCPSIEDVSLSW
NECGDELAQKLAEILPLCTKLKRLDLEANKITTKGAIEIAKCLPSCPSIEVIRVGATSNT
TTEKTLKKSRLRIPRKLREGVGDEVLPSIWPVLWAQAPTHALPLGPSTVSQR
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggaaatggtggactggcaggggggcatccaggaactggtggcccaggagtcc
agtgcaatggtggacttgttgtgtgaacagaacagcaaagttctggatcatattttttcc
ttagtggaccctaggacacagcaccaactacggtcactgaccaaaattagagaccgtgtc
tcaggcattgtaaattacttcaagaattcagatcgtattatatgtgaagagtttcttcaa
aatgtatatgagtactgtgaaaacattccctttcctctggaaaccacactgctatccata
gcaggatatgcatctggaacaaactttaatcattcaggtgacacagacaattcttcacca
acacgtaatgtgaaacgtccacggctagattatttacagagttacaaagatgctctgaaa
tccatgctactgcaaaaacacgagactgtgacacaggctgtggtgaaagatatccgtctg
aatgagacatgggtatatttaaaacataggcaccctctacgaggaaaagacagaaccacc
cagcctcaagcctctttaggcaaccaggaaggagaagatgcttcatttgagcataaagtt
tcagtggggtctcttttgaaaaccactggcaaagttttcatgctgttgggtcaggctggg
tctggtaagaccctgttggtgcactgccttggtcatagctgggctgaagactctttctca
tccattgacttgctgtttctgctggagttccggcagctcaacctcatatcacgaaacctg
tccttgaaagaactgatatttctcttctaccctccatgtgaggaagctgaggatcagagc
gaagcagtgttttctttcatcctctccaatcctgagaaggtctgcttcatatttgatggg
tatgatgagtttcgagccaagcttacggatccgaaaaagcttgatggtattattgacaca
tacaaaccacttccagtgacagatctcctctctgcactgtgcaatcgtaaaatcctccca
aactgcactgtgctggtcacctgtaggccacgagatgtgacagacatgtttgggagtcat
ggtttcataacttgtgagctgatagggtttgaccgtttgggtgtgaaggaatacactgag
cagtacttccatgaaaagggagatgaatttaaagaaaaggctgtaaatttgttgatggac
agtcatcacctcctttccatgtctcatgtgcctggactctgtcatatctgctgtgtttgt
gtggattatatgttctccatttctggaactcatgctagtctacagctacccgtgtcctta
acccaaatctacattcagatcttatttgcctttctcagccgcttcaatggggaggggatg
tctagcgcatctttgatgcagagatacagaactaaaattgctgagatgagccagctggcc
cttaaaggattggagggaagctgcatcgttttcacggctgcagaagtttcgacagagctt
caggattttggcgtcagaactgggatcctgtctcgtgtgaatctgacatgtgaggatgga
tcttcaggatatggtttcaccttcatgcacctcactatgcaggagttcctcgctgctctc
catctcatgaccagccaaagcatcacagagagtcatcttaagaagaagctaaacttgaaa
acccgctggaccaccaaaatagatccaaaatctgtctttaccgactccctccatctttat
gtgtgtgggcttgcggctgaggcctgcacctcctgtctggtccagctgaaagggacagag
gaagtcagaacttgggtacaggtgcgccaagctgcagtccgaggcattttgtttgcttta
gcaggaaatgccagtcagacgggccccaaaatagtagagctgtgccgatgtgctcaagag
acacaagatgctaaactggcaagggctattggttcgagacctcgcttcgaactgcgcaat
atcagactcagtgctgttgacatggaggccttggcatttgtaacagcagctgcagatcag
actgtatgtctggactttggtggctgctccattgacctggattgtttggaaatcctccct
tgtttcaagaatgtggatcacctcattttccgtagccggaaatatgatgacaagtttgca
gaggctttgtgtggtatcctgtccaaactccaggccttacggcgattagaatttatcagt
gggggcctcactgatgttggagctgctcaacttgccagggctttggaggactgtacacat
atcacgcatctaaatgtcagtgataactccttgaaagacgagggtataggacagattgtg
aaaacactatccaaactgcccaacatctgctctattttgatggacaaaagcagcatctcc
acagatggaatcctaatgctcactgaaaagatggccgtctgcccttccattcagaaagtc
tatgttgagggaagtaaggatgtccgtatttccttctctcaaacctctgacacaatcagt
gaaagagtggtcctgaataacaaagaagaggcaaagaatgtgacactgaagcagtgttac
ttcacctgtactaatgttgccagcctgtgtaataaactcaagggctactccttcttaact
gttttagatttgtccaaaaactcgttgggtaacaagggcctaaagaaattgatggacctt
ctgcctaaacttggaattattcaggagatcaatatcagtgaaaatggagtaaatatggat
gggttggtgctgcttgcttctgccctctgtactcagaaggacctgatgaaagtagatgca
agtgaaaatggaaagaaaacattggttctttggtttgacaccagcggaagacattcaaaa
cagttgaccccaaaggaaactggattacatctgcataaaaaactgagtttaacccatagt
aatatccaacctacctacatgaccaaactgtgtaagcaactggttaagtgtaaaaacctt
ctggatattgagttctcccatctaaaattgtcaaacgagtcggttaaaaatttgattttg
attcttcctgaaatgtcttctcttcaacttctgaacctaagtcatgttgacatgtctacg
aatggggctctgttattggtcagatctcttgctgactgtcagcgtgtcactgctgtagaa
ctcaggcaccaggcagaagcattcattaagtttgtcccagtcaaagcagaggcagcaatt
tgcaagctcacagagtataagctaagcagaaccaatgttgagaagctctcaatgatactg
gagggctgtcctcacctagctgaactggatttgtcccataaccttctcaaagatgagggg
gtgaaatgttttgtcgattgtttgccgaaactaaagatctccagatcagtgagcctcaat
ggcaacagaatgactcaagtgggggctctgcatctggtcaactcaatgaacacctgcgag
aaagtggtttctgttgaagtcagtcttggagtggaagatcagtctctgattcagtttgtg
cagaaacatgtcaacggcaagactatcagactgagggagtgcagcttcgaggccaaccac
ttacagaagcttgtggaaatactgaaccgatgcccaagactacttacattagaattgtca
tctagttcactgcacaatcaaggcctgttttctttactgaacagtctggccaaactatcc
tcaattcaaactgtaaagctaagaaataatggtctgagttctgaacagattgggtatttt
gtgaagcagctcagtaactatcgccaacacagagacatctggattgaagagctgtggatg
acaggaggtgctgttgtcagtcttgttggtaactgcctaaaactggagccacacatcaga
gaaatgagggtcaacaattcatccataaacatcattatggaggccaattccagtttcagc
tttaattctatatctcattctgaaatcagagagctctcactatgtactctgcgatccatc
agctttggtgactgtgacatagaaggacatcatctcactcctctgacacttcctatccaa
aaatgtcatgccttgcaggatttgaagttttctcagctcaaaatggacagaaaaggcgca
gagtttttttctctagtcattccgtctttattgaatctaaggaacctcattcttgatttg
aaaggagcagctgaagatgatttgataatactaatggaagcattaccaaacaatcaaaca
tttgagagtctgagtttgtctcagctcattttaggtgaccgtggaaccacagtacttgcc
agagtacttaaaaaagtaccaaatctgaggtcactcaatctctctcagtgctctggttgg
acagcagctcgagggagggaattgttcataggtctggtgcagtgcttctcgcttgaagag
atccggctggactctgtggtattggatgaagagggcataaacatcttggcacaaggcttc
tgcactatgggctcacttaggaggctcagcttgaacaacattagagtggagacatgcact
ggcatactctgcctactgacttcttttcaggcttttagacagatggaagagattgagtta
gatggcatgcgaatgggagatagtggaacacatgagcttttgaagcacattccctcatgg
actgaactaagaaaaataagtttgtcagacaacagtgtgagtgaccaggctggagagaag
ctagtggaggcactatcccactgcagagctcttcaacaattacagctctccaaaaaccag
cttggtgaagccagtgctgctaaactaactcaagtccttccgttactgtctcagctctca
gatctggatttgtcagagaatcagtttggtccaaaaggatgtttaattctttgtgaaggt
ctggtcaacaagacagcactgaaaagactgcacttgacttcgattgggagttcagatctg
gtcggtgtggccacaaccctcatatgctgtccatccatagaggatgtcagcttgtcatgg
aatgaatgtggtgacgaactggcacagaaactggctgagattttgcccctgtgtacaaag
ttgaaaagacttgacctggaggccaataaaataaccacaaaaggagccatagagattgcc
aaatgcctcccatcatgcccttccattgaagtaataagagttggtgcaaccagtaataca
acgacagagaagacgctcaagaaaagtaggctacgtattccgagaaagcttcgagagggt
gtgggagacgaggtactcccgtctatatggcctgtactctgggctcaggccccgacgcat
gccctgccattgggccccagcactgtgtcacaaaggtag
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