Massilia violaceinigra: CR152_04425
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Entry
CR152_04425 CDS
T05157
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mass
Massilia violaceinigra
Pathway
mass03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CR152_04425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mass03021
]
CR152_04425
03400 DNA repair and recombination proteins [BR:
mass03400
]
CR152_04425
Enzymes [BR:
mass01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CR152_04425
Transcription machinery [BR:
mass03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CR152_04425
DNA repair and recombination proteins [BR:
mass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CR152_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ATQ73844
UniProt:
A0A2D2DFT3
LinkDB
All DBs
Position
958905..959882
Genome browser
AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIDVEALGAGHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSSLDGVQEDVVDLLLNLKGVVFKVHNRDSVTLTLKKEGEGAILASDIDLPHDVEL
INPDHVIAHLTAGGKLDMQIKVEKGRGYVPGNVRRLSEDTNKTIGRIILDASFSPVRRVS
YFVESARVEQRTDLDKLVINIETNGVITPEEAIRQSARVLVDQLNVFAALEGTEAAAEAP
SRAPLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtctgttgaagccacgtattatcgatgtagaagccctcggtgccggtcac
gccaaagtcgtgatggagccgttcgagcgtggctatggccatacattgggtaatgcgttg
cgccgcgtactgctgtcgtcgatggttggctacgcgccaaccgaagtgacgatcgccggc
gttgtccatgagtattcgtcgctggacggcgtgcaagaagacgtggtcgacctgttgctg
aacctgaagggcgttgtgttcaaagtgcacaaccgcgattccgtcacgctgaccctgaaa
aaggaaggcgaaggcgcgatcctggcttccgacatcgacctgccgcatgacgtcgagctg
atcaatccagaccacgtgattgcccacctgaccgctggcggcaagctggacatgcagatc
aaggtcgaaaaaggccgtggctatgtgccgggtaacgtgcgccgcctgtcggaagacacc
aacaagacgatcggccgcatcattctggacgcctcgttctcgccggtgcgccgcgtgtcg
tacttcgttgaatcggctcgcgtcgaacagcgtaccgacctcgacaagctggtgatcaac
atcgaaaccaacggcgtcatcacgccggaagaagcgatccgtcaatcggcgcgcgtcctg
gtcgatcaactgaacgtgttcgcggcgctggaaggcaccgaagcagccgctgaagctcct
tcgcgcgcaccgctggtcgatccgatcctgctgcgtccggtcgacgacctggaactgacc
gtgcgttcggccaactgcctgaaagcagaaaacatttactacatcggcgacctgatccag
cgttcggaaaacgaactgctcaagacgccgaacctgggccgcaagtccctgaacgaaatc
aaggaagtgctggcttcgcgcggcttgaccttgggcatgaagctcgaaaactggccacca
gccggcctcgagaagtaa
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