Massilia violaceinigra: CR152_07975
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Entry
CR152_07975 CDS
T05157
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mass
Massilia violaceinigra
Pathway
mass00040
Pentose and glucuronate interconversions
mass01100
Metabolic pathways
mass02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CR152_07975
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CR152_07975
Enzymes [BR:
mass01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CR152_07975
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ATQ74457
UniProt:
A0A2D2DHJ9
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All DBs
Position
complement(1775739..1777175)
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AA seq
478 aa
AA seq
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MKLLPLAALISTTLFASAAVHAADWPEGFSKCAAQGGTCDVGASKRKVSFGIKNKWVVKS
LSGKVACTVATFGSDPYPSLDKKCALGPLDGGTTPPTTPPTTPPTTPPTTPPSDTDPLTQ
AAPATGWASHGTGTRGGAAAAQKDVFLVSTPSQLLAALKTEGGKPVQIKVYGTIDMAADG
PFKSVADQGVRSLISLPSNSTLIGVGPNAGIVNGRIMIKGVDNVIVRNLTIANPCDIAPV
WDPKDTSTGNWNSRYDGMNVDKSTHVWIDHNTFTDAPRTDDQFPKENGKLKQCHDGSLDI
KNGADYVTVSNNVFKLHEKNTLVGSSDDTTTDDGHLTVTFHGNHYLDITGRSPRVRFGKV
HIYNNYFQGDRDAKLYPHHYSIGVGYKAKIVSQHNAFDVLGAKECGDVVQASGSSSKTGA
IVDSGSQLNGAALGMGGESCKFSNAIGWTLPYTPAVIDASKVRESVLRNAGAGKLSVR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgttaccccttgcagcactgatcagcaccactctcttcgccagcgccgccgtc
catgccgcggactggccggaaggtttctcgaaatgcgccgcccagggcggaacctgtgac
gtcggtgccagcaagcgcaaggtgtcgttcggcatcaaaaacaaatgggtcgtcaaatcg
ctcagcggcaaagttgcctgcaccgtcgccacgtttggcagcgatccctatccgagcctc
gacaaaaaatgcgcgctaggcccgctcgatggcggcaccacgccgccgaccaccccgcca
acgacaccaccaacgacgccgccaactacgccgccatccgacaccgatccgctgacgcag
gcagccccggcaaccggatgggccagccacggcaccggcacccgcggcggcgcggcggcg
gcgcagaaggatgtcttcctggtcagcacgccatcgcaactgctggccgcactcaagacc
gagggcggcaaaccggtgcagatcaaggtctacggcaccatcgacatggccgccgacggt
ccgttcaagagtgtcgccgaccagggcgtgcgcagcctgatttcgctgccctcgaacagt
accctgatcggcgtgggcccgaatgcgggcatcgtcaacggccgcatcatgatcaagggc
gtggacaacgtcatcgtgcgcaacctgaccatcgccaatccatgcgacatcgccccggta
tgggatccgaaagataccagtaccggcaactggaactcgcgctacgacggcatgaacgtc
gacaagtcgacccacgtctggatcgaccacaacaccttcaccgatgcgccgcgcaccgac
gaccagttcccgaaagagaatggcaaactcaagcaatgccacgatggctcgctcgacatc
aagaatggcgccgactacgtgaccgtgtcaaacaatgtgttcaagctgcacgagaaaaac
accctggtcggctcgtccgacgacaccaccaccgacgatggccacctgacggtgactttc
cacggcaatcattacctggacatcaccggccgttcgccgcgtgtgcgtttcggtaaggtt
cacatctacaacaactacttccagggcgaccgcgacgccaagctgtacccgcaccactac
agcatcggcgtgggttacaaggccaagatcgtgtcgcagcacaatgctttcgacgtcctc
ggcgccaaggaatgcggcgatgtggtccaggcttcgggttcgtcgagcaaaaccggcgcc
atcgtcgacagcggttcccagctgaacggcgcggcactgggcatgggcggcgaaagctgc
aagttcagcaacgcgatcggctggaccctgccatacaccccggccgtgatcgatgcgtcg
aaagtgcgcgaatcggtcctgcgtaatgcaggcgccggcaagctcagcgtcaggtaa
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