Massilia violaceinigra: CR152_08875
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Entry
CR152_08875 CDS
T05157
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
mass
Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mass03009
]
CR152_08875
Enzymes [BR:
mass01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CR152_08875
Ribosome biogenesis [BR:
mass03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CR152_08875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ATQ74620
UniProt:
A0A2D2DI16
LinkDB
All DBs
Position
2002632..2004683
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AA seq
683 aa
AA seq
DB search
MNPTKSTETSTADVTGMDEAVAKPKRRTKAQIEADAAAGTDAPKPKRAAAKKAVADVEAA
APAEAPVAKAPAKPRAKKAAAVEAPAVVAGESAPAAASTAAPAADTPAPAARKPRAPKAA
ATDAAQAPAADAAAPAADGTAPANQERGPRPPRGPRQMRELRGQREARIQMERAESGEPE
VVAEAPAEPVARPERGPRPARSLDAKPRVKKNKKGNPGLQHHGKNKMNDADAAFSYVTSD
AFDANDGGRAQPVKQVRRDLTSDDDAPKLHKVLAEAGLGSRRDMEDLIIAGRVSVNGEPA
HIGQRILPTDAVRINGKLIHRKVTSKPPRVLVYHKPAGEIVSHDDPEGRPSVFDRLPTMK
AGKWLAVGRLDFNTEGLLLFTTSGDLANRLMHPRYNIDREYAVRTLGELEEGMRQKLLAG
VELDDGVASFTKIADGGGEGINKWYRVVIGEGRNREVRRMFEAIGLTVSRLIRTRYGIMT
LPSNLKRGRWDEMEENTVRDLLAAFGVEKKGAGNDARGPKGRSDAKPRTDEDKRSDGNRI
DRVDANRNADPFGPPNGRGGAGRGAGGRPQGRPGGAGGGMGGGMGGQARSAGGFDGQSRG
QGQGRPQGDGQPRSARPQGDAQPRTGRPGGNGGNGGGAKGPRQPDPLQTTFGFGNAGGGN
RRPQGPQGPRSADHGMPRRGRRG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaactaaatcgacagagacaagtaccgccgacgtaacaggcatggatgaggcc
gtggccaagccaaaacgccgcaccaaggcacagatagaggcggacgccgccgccggcacc
gacgcgccgaaaccgaagcgcgccgccgccaagaaggccgttgccgacgtcgaggccgcc
gcgcccgccgaggcgccagtggccaaggccccggccaagccgcgtgctaaaaaagccgct
gccgttgaagcgcccgccgtggtagcgggcgagtccgctccggcagccgccagcaccgcc
gcgcccgcagcagatacgccagccccggccgcccgcaagccgcgcgcgccgaaagcagcc
gccaccgatgccgcgcaagctcccgccgccgatgccgccgccccggccgccgacggcacc
gcgcctgcgaaccaggaacgtggcccgcgtccgccacgcggcccgcgccagatgcgcgaa
ctgcgcggccagcgcgaagcccgcatccagatggagcgcgccgaatcgggcgagccggaa
gtcgtcgccgaagcaccggccgagccggttgcccgtcccgagcgcggtccgcgcccggcg
cgcagcctcgatgccaagccgcgcgtgaaaaagaacaaaaaaggcaatccaggcttgcag
catcacggcaagaacaagatgaacgatgccgatgccgcgttctcgtacgtgacctcggac
gcgttcgacgccaacgacggcggccgcgcgcagccggtcaagcaggtgcgccgcgacctg
acctccgacgacgacgcgcccaagctgcacaaggtgctggccgaagccggcctcggttcg
cgccgcgacatggaagacctgatcattgccggccgcgtgtcggtcaatggcgagccggcc
cacatcggccagcgcatcctgccgaccgacgccgtgcgcatcaacggcaagctgattcac
cgcaaggtcaccagcaagccgccgcgcgtgctggtgtaccacaagccggccggcgaaatc
gtcagccatgacgatccggaaggccgtccatcggtgttcgaccgcctgccgaccatgaag
gccggcaaatggctggccgtcggccgcctcgacttcaataccgaaggcttgctgttgttc
acgacctcgggtgacctggccaaccgcctgatgcacccgcgctacaacattgaccgcgaa
tacgcggtgcgtaccctgggcgagctggaagagggcatgcgccagaagctgctggccggc
gtcgagctcgacgacggcgtggcctcgttcaccaagatcgccgatggcggcggtgaaggc
atcaacaaatggtatcgcgtggtcatcggcgaaggccgcaaccgcgaggtgcgccgcatg
ttcgaggcgatcggcctgaccgtctcgcgcctgatccgtacccgctacggcattatgacc
ctgccaagcaacctcaagcgcggtcgctgggatgaaatggaagaaaacaccgtgcgcgac
ctgctggccgcgttcggcgtcgagaaaaaaggcgccggcaatgacgcgcgcggtccgaaa
ggccgcagcgacgccaagccgcgcaccgacgaggacaagcgttccgatggcaaccgcatc
gaccgcgtcgacgccaaccgcaatgccgatccgttcggtccgccaaatggacgtggcggt
gcggggcgcggtgccggtggccgtccgcaggggcgtccaggtggtgcgggcggtgggatg
ggcggcggcatgggcggacaagcgcgcagtgccggcggcttcgatggtcagagccgtggc
cagggccagggtcgcccgcagggtgatgggcagccgcgttcggcgcgtccccagggcgat
gcgcagccgcgcaccggccgtcccggcggcaatggtggcaatggtggcggggccaagggg
ccgcgccagccggatccgctgcaaacgaccttcggtttcggcaatgcaggtggcggtaat
cgccgtccgcagggtccgcaaggcccgcgcagcgccgatcacggcatgccgcgtcgcggt
cgccgcggttga
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