Massilia violaceinigra: CR152_08900
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Entry
CR152_08900 CDS
T05157
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mass
Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mass03016
]
CR152_08900
Enzymes [BR:
mass01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CR152_08900
Transfer RNA biogenesis [BR:
mass03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CR152_08900
Prokaryotic type
CR152_08900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ATQ74625
UniProt:
A0A2D2DI46
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All DBs
Position
2010707..2011630
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AA seq
307 aa
AA seq
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MKQAHIKRVRDLVDGVLLLDKPVGLSSNDALIKAKRVLNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYETTVHLGITTTTGDTEGEAIDMRDVDVTLAQIEAVLPQFRGP
IMQVPPMYSALKRDGKAYYEYAREGITLEREARPVTILKLELISFETPLLKLAVTCSKGT
YIRVLGEDIGHALGCGAHLIQLRRTQVGALTIDGMVTLEALQAHAEPLTLLAPVDALLSS
FPAVQLTEELAKRFLQGQRLALGKEALTLPDSLGRVRVYHDTRLLGTANLQEYAILAPER
LIAASHA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagcccatatcaaacgcgtgcgcgacctggtcgacggcgtgctgctgctcgac
aaaccggtcggcctgtcctccaacgacgcgctgatcaaggccaagcgcgtgctcaacgcc
aagaaagccggccacaccggcacgctcgacccgttcgccacgggtttgctgccgctgtgt
ttcggtgaagcgaccaaattctcgcaagacttgctcgaagccgacaagacctacgaaacc
acggtccacctgggcatcaccaccaccaccggcgacaccgaaggcgaagcgatcgacatg
cgcgatgtcgacgtcaccctggcccagatcgaagccgtgctgccgcagttccgcggcccc
atcatgcaagtgccgccgatgtattcggcgctcaagcgcgacggcaaggcctattacgag
tacgcgcgcgaaggcatcaccctggagcgcgaagcgcgcccggtcaccatcctcaagctg
gaactgatttcgttcgaaacgccgctgctgaagttagcggttacttgcagcaagggcacg
tatatccgcgtgctgggcgaagacatcggccacgcgctcggctgcggcgcccacctgatc
cagctgcgccgcacccaggtcggcgcgctgaccatcgatggcatggtgacgctggaagca
ttgcaggcgcacgccgaaccgcttaccctgctggccccggtcgatgccttgctgtcgagt
ttcccggcggtgcagctgaccgaggaactggccaagcgcttcctgcaagggcagcgcctg
gcgctcggtaaggaagcgctcactttgccggacagccttggccgggtgagggtgtatcac
gacacccgcctgctgggcacggcgaacttgcaggaatacgcgatcctggcgcccgagcgc
ctgatcgccgcttcgcacgcctaa
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