Massilia violaceinigra: CR152_09035
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Entry
CR152_09035 CDS
T05157
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
mass
Massilia violaceinigra
Pathway
mass02020
Two-component system
mass02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CR152_09035
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CR152_09035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mass03021
]
CR152_09035
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mass02035
]
CR152_09035
Transcription machinery [BR:
mass03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CR152_09035
Bacterial motility proteins [BR:
mass02035
]
Flagellar system
Flagellar assembly proteins
Stator
CR152_09035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
Terminase_6
GerE
HTH_23
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ATQ78788
UniProt:
A0A2D2DUY6
LinkDB
All DBs
Position
complement(2034043..2034780)
Genome browser
AA seq
245 aa
AA seq
DB search
MPGEHASEYGGAYGAAQVAEYAPVLDAREEQRQLVAYAPLVKRIVRQLNAQVSGVMGRED
MEQIGLMGLLEALRRYGMPDAGFGSFASLRIRGAILDELRRQDWRPRAVRQDSHKMRDQV
RALTRSLGREPNDQEAAAALGLTPEAYVQYQLDDGAELLLSFDEVLQEAAERAHSAPGPE
EQFMVKHSLEQALMALDEREQRVIQMIYEFELSYKEVAAVLDLSDARVCQLNKAALAKMK
AALKG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgccaggtgaacacgccagcgagtacggcggcgcttacggcgccgcccaggtggccgag
tacgcgcccgtgctcgacgcccgcgaagaacagcgccagctggtggcctacgcgccgctg
gtcaagcgcatcgtgcgccagttgaacgcccaggtctcgggcgtgatggggcgcgaagac
atggaacagatcggcctgatgggcttgcttgaagcgctgcgccgctacggcatgccggac
gccggtttcggcagcttcgcttccttgcgcatccgcggcgccatcctcgacgaactgcgg
cgccaggactggcgtccgcgcgcggtgcgccaggacagccacaagatgcgcgaccaggta
cgcgccctgacccgctcgctcgggcgcgagccgaacgaccaggaagcggccgccgccctg
ggcctgacacccgaagcctacgtgcaataccagctcgacgatggcgccgagctgctgctc
agctttgacgaagtgctgcaggaagccgctgaacgggcccacagcgcgcccggcccggaa
gagcagttcatggtcaagcacagcctggaacaggccctgatggccctcgacgagcgcgag
cagcgcgtgatccagatgatttacgaatttgaactgagctacaaggaagtggctgccgtg
ctggatctgtcggacgcgcgcgtctgccagctcaacaaggcggcgctggccaagatgaaa
gcagctctcaaaggctga
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