Massilia violaceinigra: CR152_10870
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Entry
CR152_10870 CDS
T05157
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mass
Massilia violaceinigra
Pathway
mass03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CR152_10870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mass03019
]
CR152_10870
Enzymes [BR:
mass01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CR152_10870
Messenger RNA biogenesis [BR:
mass03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CR152_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
ATQ74972
UniProt:
A0A2D2DJ36
LinkDB
All DBs
Position
complement(2412461..2413861)
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AA seq
466 aa
AA seq
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MIKKFIRKMLGVKEKQPVRDLTEPIILGAAEHGIDSKLLSSNAIRVTQTLQEAGFKAFVV
GGAVRDLLLSVKPKDFDIATDATPEQVKRLFRRAFIIGKRFQIVHVMFGSDLLEVTTFRG
AGESSAPKDEHGRVLRDNNFGPQHEDAMRRDFTINAMYYDPATQVVLDYHGGIADIRDKT
LRIIGQPEARYREDPVRLLRVVRFAARLGFTIEPHTREPIPVMAPLINNVPAARVFDEML
KLLMSGHALACLQQLRKEGLHHGLLPLLDVVLEQPIGMKFVTLALESTDNRVKAGKGVSP
GFLFASLLWHQVVEKWTAYRAAGESPIPALHLAADDVLDSQTEKLALQRKIGSDMRDIWS
MQPRFERRNGKAPYKLLEHPRFRAGYDFLLLRCESGEIEMEIGEWWTAFYEGDAVERETL
LTTAVAAPAGAKRKRPPRRAPRNRASGEGGDTATTTSTTGSTSGDE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaattcatccgcaaaatgctcggcgtcaaagagaagcagccagtgcgcgac
ctgaccgaacccatcatcctgggcgcggcggagcacgggatcgattccaagctgctgtcg
tcgaacgcgatccgcgtgacccagacattgcaggaggcgggcttcaaggcgttcgtggtg
ggcggcgccgtgcgcgacctgctgctgtcggtcaaaccgaaggacttcgacatcgccacc
gatgccacgcccgaacaggtcaagcgcctgttccggcgcgccttcatcatcggcaagcgc
ttccagatcgtgcacgtgatgttcggttccgacctgctggaggtaaccaccttccgcggc
gccggcgagtccagcgcgcccaaggacgaacacggacgggtcctgcgcgacaataacttc
ggtccccagcacgaagacgccatgcggcgcgacttcacgatcaacgccatgtactacgac
ccggccacgcaggtggtgctggactaccacggcggcattgccgacatccgcgacaagacc
ctgcgcatcatcggccagcccgaagcgcgctaccgcgaagatccggtacgcctgttgcgc
gtggtgcgcttcgccgcgcgcctgggctttaccatcgaaccgcacacgcgcgaaccgatc
cccgtcatggccccgctgatcaacaacgtgccggccgcgcgcgtgttcgacgaaatgctc
aagctgctcatgagcggccacgcactggcctgcctgcagcagctgcgcaaggagggcctg
caccacggcctgctgccgctgctcgacgtggtgctggagcagccgatcggcatgaagttc
gtcaccctggcgctggagtccaccgacaaccgcgtcaaggccggcaagggcgtctcgccc
ggcttcctgtttgcgtcgctgctgtggcaccaggtggtcgagaaatggaccgcctaccgc
gcggcgggcgagtcgccgattccggcgctgcacctggcggccgacgacgtactcgattcg
caaaccgaaaaactggccctgcagcgcaagatcggctcggacatgcgcgacatctggtcg
atgcagccgcgcttcgagcggcgcaacggcaaggccccgtacaagctgctggaacacccg
cgcttccgcgccggctacgacttcctgctgctgcgctgcgagtcgggcgagatcgaaatg
gaaatcggcgaatggtggaccgccttttatgaaggcgacgccgtcgaacgcgaaaccctg
ctcaccaccgccgtggccgcaccggccggcgccaagcgcaagcgcccgccgcgccgcgca
ccacgcaaccgcgccagtggcgaaggcggcgacaccgccaccaccaccagcaccaccggc
agcaccagcggcgacgaatga
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