Massilia violaceinigra: CR152_12365
Help
Entry
CR152_12365 CDS
T05157
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mass
Massilia violaceinigra
Pathway
mass02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CR152_12365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mass02022
]
CR152_12365
02035 Bacterial motility proteins [BR:
mass02035
]
CR152_12365
Two-component system [BR:
mass02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CR152_12365
Bacterial motility proteins [BR:
mass02035
]
Pilus system
Twitching motility proteins
CR152_12365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA_22
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ATQ75222
UniProt:
A0A2D2DJS8
LinkDB
All DBs
Position
2725669..2727114
Genome browser
AA seq
481 aa
AA seq
DB search
MTSPRVLVVDDEADLRELLEITLVRMGLDVDSAETLREARAFLAQNDYGLILTDMRLPDG
LGLELVQEVNASNKSTPIAVVTAYGSAENAVVALKAGAFDYVSKPVVLDDLRVMVQSALR
LSAPSTQTGSPAAAGTASRLIGESAVMQSLRNQIERLARSMAPIAITGESGSGKELVARE
IHARSSRAGKPFIAVNCGAIPEALMEAEFFGYRKGAFTGAADERDGFFHAANGGTLMLDE
VADLPLAMQVKLLRAIQERRVRKIGATSEEPVDVRIISATHQNLAQCVETGKFRQDLFYR
LNVIELSVPPLRERLDDLGVLVDGMLARLAGPGQKAALGPQVLETLSTYSFPGNVRELEN
VLERALAFANDGVIEVGDLSLKGARVAERPAPAAEAVVAPVPAAVQAAMAPHTAAAPVSA
SGPAELPSNLPNYLEQVEREIILRALTQTQFNRTQAALLLGISFRQLRYQMQKLDIQEPE
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaccccgcgtactggtcgtcgatgacgaggcggatttacgcgaactgctggaa
atcacgctggtcaggatggggctcgatgtggacagcgccgaaacgctgcgcgaggcgcgc
gctttcctggcgcagaacgattacggcctgatcctgaccgacatgcgcctgcccgacggc
ctgggcctggaactggtgcaggaagtgaacgcttccaacaaatcgaccccgatcgcggtc
gtgaccgcctacggcagcgccgaaaacgcggtggtggccttgaaggcgggcgccttcgat
tacgtgtccaagccggtggtgctggacgatctgcgcgtcatggtgcagtcggccctgcgc
ctgtcggccccgtccacgcagaccggcagcccggccgccgccggcacggcctcgcgcctg
atcggcgaatcggccgtaatgcagtcgctgcgcaatcagatcgaacggctggcgcgctcg
atggcgccgattgccattacgggcgagtcgggcagcggcaaggaactggtggcgcgcgaa
atccacgcccgcagttcgcgcgcgggtaagcccttcattgccgtgaactgcggcgcgatt
cccgaagcgctgatggaagccgagtttttcggctaccgcaagggcgcgtttacgggcgcg
gccgacgagcgcgacggatttttccatgcggccaacggcggcaccctgatgctcgatgag
gtggccgatctgccgctggcgatgcaggtcaagctgctgcgcgcgatccaggaacggcgc
gtgcgcaagatcggcgccaccagcgaggagccggtcgatgtgcgcatcatcagcgccacg
caccagaacctggcgcagtgcgtcgagaccggcaagttccgccaggatctgttttaccgc
ctgaatgtgatcgaattgagcgtgccgccgctgcgcgagcggctcgacgacctgggtgtg
ctggtcgatggcatgctggcgcgcctggccggaccggggcagaaagccgcgctcgggccg
caggtgctggaaaccttgagcacgtattcgtttccgggcaatgtgcgcgagctcgagaac
gtgctggaacgggcgctggcgttcgccaacgatggcgtgatcgaagtgggcgacctgtcg
ctcaagggcgcgcgggtggccgagcggccggcgccggcggccgaggcggtggtggcgccg
gtgccggcggccgtgcaggcggcgatggcgccgcacacggcggccgcgccggtgagtgcg
agcgggccggcggagttgcctagcaacttgcccaactatctggagcaggtcgagcgcgag
atcattctgcgtgcgctgacccaaacccagttcaaccgcacccaggcggccctgctgctg
gggatcagttttcggcagctgcgctatcagatgcagaagctcgatatccaggagccggag
ggctag
DBGET
integrated database retrieval system
