Massilia violaceinigra: CR152_12460
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Entry
CR152_12460 CDS
T05157
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mass
Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mass03016
]
CR152_12460
Enzymes [BR:
mass01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CR152_12460
Transfer RNA biogenesis [BR:
mass03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CR152_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ATQ75239
UniProt:
A0A2D2DJU0
LinkDB
All DBs
Position
2746401..2748476
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AA seq
691 aa
AA seq
DB search
MNLFFEESGDFKVGTVLSQAGEAYQVEMPSGKRTKVKVKDVLLQYEKPSAAELLEAAKAV
AADVDFEFLWEVAGQEEFGFAELGAEYFGHAPLPSEAAGLILALHGAPIYFYKKGRGRYK
AAPEASLRAAQAGIEKKKQQGLIQAGYVDELKANRLPEAMRPLVQQLLFKPDKNSIEFKA
LDAACNELHTTPQRLMLAAGGIGSPKELHMARFLFENFPRGSGFPAVTVPAAPTSLPLAD
VAAFSIDDVTTTEIDDAFSVVTLADGMVRVGIHIAAPGLGIRPDDAIDKMARARMSTVYM
PGDKITMLPDELVAAFTLAEGKTCPAVSLYATIDPADWSVKSTVTRAELVPIKSNLRNND
LDDVVSEEALAAGTGEYPHKAELGTLWQWALTLEAARMVKREGFGLKPEQNNRVDFNFYV
EDDVVTVLRRKRGAPLDKIVAELMIFANSTWGKLMHDSGVPGIYRSQGAGSGAGWAAKMQ
VRMVTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQILACAEHGVTAPLVAPFKPRDANL
FAIVSAFDAAYAAYNDHQQNMERYWCLRWLGQQDQRQVEAVVLKDEVLRLTDIPLIIRLP
GMPQVARGAQVKLDILRWDELELTIEARLLELPASSEIAADADLDYEEEEAAAPDTAAPD
SGEAATAEAAAMEAVEAEGAVTVITSEPAAG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaatctattttttgaagaatccggcgatttcaaggtcggcaccgtgttgtcgcaagcg
ggcgaggcgtaccaggtcgaaatgccaagcggtaagcgcaccaaggtcaaggtcaaggat
gtgctgctgcagtacgaaaagccatccgcggccgagctgctggaagcggccaaggcggtc
gccgccgacgtcgatttcgagttcctgtgggaagtcgccggccaggaagagttcggtttc
gccgagctgggcgccgagtatttcggccacgccccgctgccgtccgaagcggccggcctg
atcctggcgctgcacggcgcgccgatctacttctataaaaagggacgcggacgctacaag
gctgccccggaagcatccctgcgcgcggcccaggccggcatcgagaaaaagaaacagcag
ggcttgatccaggccggctatgtggacgagctcaaggccaaccgcttgccggaagccatg
cgtccgctggtgcagcaactgctgttcaagccggacaagaacagcatcgaattcaaggcg
ctcgacgccgcctgcaacgaactgcacaccacgccgcagcgcctgatgctggcggcgggc
ggcatcggttcgcccaaggaattgcacatggcgcgcttcctgttcgagaatttcccgcgc
ggatcggggttccccgccgtgacggtgccagccgcgccgaccagtttgccgctggccgac
gtggccgccttctcgatcgatgacgtcaccaccaccgaaatcgacgatgccttctcggtc
gtcaccctggcggacggcatggtgcgggtcggcatccacatcgccgcgccgggcctgggc
attcgccccgacgacgccatcgataaaatggcgcgcgcgcgcatgtcgaccgtctatatg
ccgggcgacaaaatcaccatgctgccggatgaactggtggccgcgttcaccctggccgaa
ggcaagacttgcccggcggtgtcgctgtacgccaccatcgacccggccgactggagcgtg
aagtcgaccgtcacccgcgccgaactggtgccgatcaagagcaatctgcgcaacaacgac
ctggacgatgtggtcagcgaagaagcgctggccgccggcaccggcgagtatccgcacaag
gccgagctgggtacgctgtggcagtgggcgctcaccctggaagcggcgcgcatggtcaag
cgcgaaggcttcggcctgaaacccgagcagaacaaccgggtcgacttcaatttctacgtc
gaggacgacgtggtgacggtactgcggcgcaagcgcggcgccccgctcgacaagatcgtg
gccgagctgatgatcttcgccaacagcacctggggtaagctgatgcacgactcgggcgtg
ccgggtatttaccgctcgcaaggcgcgggcagcggcgccggctgggccgccaagatgcag
gtgcgcatggtcacccacgccgccccgcaccagggcctgggtgtggaccagtacgcatgg
agcacctcgccgctgcgccgctacaccgacctggtcaaccagtggcagatcctcgcttgc
gccgagcacggcgtgacggcgccgctggtggccccgttcaagccgcgcgacgccaacctg
ttcgccattgtctcggcgttcgacgccgcctacgccgcctacaacgatcaccagcagaac
atggagcgctactggtgcctgcgctggctcggccagcaagaccagcgccaggtggaagcg
gtcgtgctcaaggatgaagtgttgcgtctgaccgacattccgctgatcatccgcctgccc
ggcatgccgcaagtggcgcgcggggcccaggtcaaactcgacatcctccgctgggacgag
ctggagctgacgatcgaagcgcgcctgctggaactgcccgccagcagcgagatcgccgcc
gatgccgacctcgactacgaggaagaagaggcggcggcgccggacactgccgcgcccgat
agcggcgaagcggccaccgcggaagcggccgccatggaagcggtggaagccgaaggcgcg
gtcaccgtcatcaccagcgaaccggcggccggctag
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