Massilia violaceinigra: CR152_13090
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Entry
CR152_13090 CDS
T05157
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mass
Massilia violaceinigra
Pathway
mass02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CR152_13090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mass03021
]
CR152_13090
Transcription machinery [BR:
mass03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CR152_13090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ATQ75346
UniProt:
A0A2D2DK36
LinkDB
All DBs
Position
2889042..2889551
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AA seq
169 aa
AA seq
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MPAAELVLQQEMHALYRGHHGWLYGWLRHKLGCSEQAADPAQDTFVRVLAARNVARIAEP
RAYLTTVAKGILVNWYRRQALERAWLDAIARLPEASVPSPEERYLLLETLQRVDAMLDAL
PPPVRRAFLLSQLDGTKYDDIAVLLGVSGVTVKRYMKQAFLHCLMLADA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgccgagctcgtcctacagcaagaaatgcacgcgctctaccgcggccatcac
ggctggctgtacggctggctgcgccacaagctgggttgctcggaacaggccgccgacccg
gcgcaagacacgttcgtgcgcgtgctggcggcccgcaacgtggcccgcatcgccgagccg
cgcgcctatctcaccaccgtcgccaaaggcatcctggtcaattggtaccggcgccaggcg
ctggagcgggcctggcttgatgccatcgcccggctgcccgaggccagcgtgccgtcaccg
gaagagcgctacctgctgctggaaaccctgcagcgggtcgatgccatgctcgacgccctg
ccgccgccggtacggcgcgccttcctgctgtcccagctcgacggcacgaagtacgacgac
attgccgtgctgctcggcgtgtccggcgtcaccgtcaagcgctacatgaaacaagccttc
ctgcactgcctgatgctggccgacgcgtga
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