KEGG   Massilia violaceinigra: CR152_13090
Entry
CR152_13090       CDS       T05157                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
mass  Massilia violaceinigra
Pathway
mass02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mass00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CR152_13090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mass03021]
    CR152_13090
Transcription machinery [BR:mass03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CR152_13090
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_11
Other DBs
NCBI-ProteinID: ATQ75346
UniProt: A0A2D2DK36
LinkDB
Position
2889042..2889551
AA seq 169 aa
MPAAELVLQQEMHALYRGHHGWLYGWLRHKLGCSEQAADPAQDTFVRVLAARNVARIAEP
RAYLTTVAKGILVNWYRRQALERAWLDAIARLPEASVPSPEERYLLLETLQRVDAMLDAL
PPPVRRAFLLSQLDGTKYDDIAVLLGVSGVTVKRYMKQAFLHCLMLADA
NT seq 510 nt   +upstreamnt  +downstreamnt
atgcctgccgccgagctcgtcctacagcaagaaatgcacgcgctctaccgcggccatcac
ggctggctgtacggctggctgcgccacaagctgggttgctcggaacaggccgccgacccg
gcgcaagacacgttcgtgcgcgtgctggcggcccgcaacgtggcccgcatcgccgagccg
cgcgcctatctcaccaccgtcgccaaaggcatcctggtcaattggtaccggcgccaggcg
ctggagcgggcctggcttgatgccatcgcccggctgcccgaggccagcgtgccgtcaccg
gaagagcgctacctgctgctggaaaccctgcagcgggtcgatgccatgctcgacgccctg
ccgccgccggtacggcgcgccttcctgctgtcccagctcgacggcacgaagtacgacgac
attgccgtgctgctcggcgtgtccggcgtcaccgtcaagcgctacatgaaacaagccttc
ctgcactgcctgatgctggccgacgcgtga

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