Massilia violaceinigra: CR152_13970
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Entry
CR152_13970 CDS
T05157
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mass
Massilia violaceinigra
Pathway
mass00010
Glycolysis / Gluconeogenesis
mass00020
Citrate cycle (TCA cycle)
mass00260
Glycine, serine and threonine metabolism
mass00280
Valine, leucine and isoleucine degradation
mass00310
Lysine degradation
mass00380
Tryptophan metabolism
mass00620
Pyruvate metabolism
mass00630
Glyoxylate and dicarboxylate metabolism
mass00640
Propanoate metabolism
mass00670
One carbon pool by folate
mass00785
Lipoic acid metabolism
mass01100
Metabolic pathways
mass01110
Biosynthesis of secondary metabolites
mass01120
Microbial metabolism in diverse environments
mass01200
Carbon metabolism
mass01210
2-Oxocarboxylic acid metabolism
mass01240
Biosynthesis of cofactors
Module
mass_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mass_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mass_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mass_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CR152_13970 (lpdA)
00020 Citrate cycle (TCA cycle)
CR152_13970 (lpdA)
00620 Pyruvate metabolism
CR152_13970 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CR152_13970 (lpdA)
00640 Propanoate metabolism
CR152_13970 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CR152_13970 (lpdA)
00280 Valine, leucine and isoleucine degradation
CR152_13970 (lpdA)
00310 Lysine degradation
CR152_13970 (lpdA)
00380 Tryptophan metabolism
CR152_13970 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CR152_13970 (lpdA)
00670 One carbon pool by folate
CR152_13970 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mass04147
]
CR152_13970 (lpdA)
Enzymes [BR:
mass01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CR152_13970 (lpdA)
Exosome [BR:
mass04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CR152_13970 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
GIDA
Pyr_redox_3
FAD_oxidored
AlaDh_PNT_C
NAD_binding_8
GCV_H
Biotin_lipoyl_2
RnfC_N
3HCDH_N
DEC-1_N
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ATQ75504
UniProt:
A0A2D2DKJ3
LinkDB
All DBs
Position
3113517..3115340
Genome browser
AA seq
607 aa
AA seq
DB search
MSTIEVKVPNIGDFKEVEVIEVMIKVGDTIKVDQSLITVESDKASMEIPASHAGVVKEIK
VKVGDKIAEGSMLLVLDEAGGAAAAPAAAAPAAAAPAPAAADRAESQAPAHPTPPAAPSA
AAPAPAMAKYDGKVDIECEMMVLGAGPGGYSAAFRSADLGMNTVLIERYASLGGVCLNVG
CIPSKALLHVAAVIDETQAMSKHGISFAKPDIDIDQLRAYKDKVITKMTTGLAGMAKMRK
VNVVQGVGQFVSANHIEVTAADGSKKIVQFQKAIIAAGSAVVNLPFVPKDPRIVDSTGAL
ELRQIPKRMLVIGGGIIGLEMATVYSTLGARIDVVEMLDGLMQGADRDMVKVWQKFNEKR
FDKVMTKTKTVAVEALEEGIKVTFEAAEAGVTAPEPQIYDMVLVAVGRSPNGGKIAAAKA
GVTVTDRGFIPVDAQMRTNVPHIFAIGDLVGQPMLAHKAVHEAHVAAEAAHGEKAFFDVK
VIPSVAYTDPEVAWVGITEDEAKAKGIKLEKGHFPWAASGRAVANGRDEGFTKLLFDAET
HRIVGGGIVGTHAGDMIGEIALAIEMGADGIDIAKTIHPHPTLGESIGMAAEVYEGVCTD
LPPVRKK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaatcgaggtaaaagtaccgaatatcggcgacttcaaggaagttgaagtcatt
gaagtgatgatcaaggtgggcgacacgatcaaggtcgaccagtccctgatcaccgtcgaa
tccgacaaggccagcatggaaatcccggccagccatgccggcgtggtcaaggaaatcaag
gtcaaggtgggcgacaagatcgccgaaggctcgatgctgctggtgctcgacgaagccggc
ggcgccgcggcggctcctgcggcggcagcacctgccgcagcggctccggcgccggcggcg
gccgaccgggccgaatcgcaggcgcctgcgcatccgacgccgccagcggccccaagcgcg
gcagcgccagcgccggccatggccaagtacgacggcaaggtcgacatcgaatgcgagatg
atggtgctgggcgcgggtcccggcggctattccgcggcgttccgttcggccgacctgggc
atgaacaccgtgctgatcgagcgttacgcgtcgctgggcggcgtgtgcctgaacgtcggc
tgcattccatcgaaagcgctgctgcacgtggccgccgtgatcgatgaaacgcaagccatg
tccaagcacggcatcagcttcgccaagccggacatcgacatcgaccagctgcgcgcctac
aaggacaaggtcatcaccaagatgaccaccggtctggcgggcatggccaagatgcgcaag
gtgaatgtggtgcagggcgtcggccagttcgtcagcgccaatcacatcgaagtgaccgcc
gccgacggcagcaagaagatcgtgcagttccagaaggcgatcatcgccgccggttcggcc
gtggtcaacctgccgttcgtgccgaaagatccgcgcatcgtcgattcgaccggcgcgctg
gaactgcgccagatcccgaaacgcatgctggttatcggcggcggcatcatcggcctggaa
atggcgacggtgtactcgaccctcggtgcgcgcatcgatgtcgtcgagatgctcgatggc
ctgatgcagggcgccgaccgcgacatggtcaaggtctggcaaaagttcaacgagaagcgc
ttcgacaaggtcatgaccaagaccaagacggttgccgtggaagcgctggaagagggcatc
aaggtcacgtttgaagcggcggaagccggcgtcaccgcgcccgagccgcagatctacgac
atggtgctggtggccgttggccgcagcccgaacggcggcaagatcgcggccgccaaggcc
ggcgtgacggtcaccgaccgtggtttcattccggtcgacgcgcagatgcgcaccaacgtg
ccgcacattttcgccatcggcgatctggtgggccagccgatgctggcgcacaaggcggtg
catgaagcgcacgtcgccgccgaagcggcgcatggcgagaaggccttcttcgacgtcaag
gtgattccatcggtggcctacaccgatcccgaagtggcatgggtcggcattaccgaagac
gaggcgaaagccaagggcatcaagctggagaagggccacttcccgtgggccgcaagcggc
cgcgcggttgccaatggccgcgacgagggcttcaccaagctgctgttcgacgccgagacg
caccggattgtcggtggcggcatcgtcggcacgcatgcgggcgacatgatcggcgaaatc
gcgctggcgatcgagatgggtgccgatggcatcgatatcgccaagacgatccacccgcat
ccgaccctgggcgagtcgatcggcatggcggcggaagtgtatgaaggcgtgtgcacggac
ttgccgccggtgcgcaagaagtaa
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