KEGG   Massilia violaceinigra: CR152_13970
Entry
CR152_13970       CDS       T05157                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mass  Massilia violaceinigra
Pathway
mass00010  Glycolysis / Gluconeogenesis
mass00020  Citrate cycle (TCA cycle)
mass00260  Glycine, serine and threonine metabolism
mass00280  Valine, leucine and isoleucine degradation
mass00310  Lysine degradation
mass00380  Tryptophan metabolism
mass00620  Pyruvate metabolism
mass00630  Glyoxylate and dicarboxylate metabolism
mass00640  Propanoate metabolism
mass00670  One carbon pool by folate
mass00785  Lipoic acid metabolism
mass01100  Metabolic pathways
mass01110  Biosynthesis of secondary metabolites
mass01120  Microbial metabolism in diverse environments
mass01200  Carbon metabolism
mass01210  2-Oxocarboxylic acid metabolism
mass01240  Biosynthesis of cofactors
Module
mass_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mass_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mass_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mass_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mass00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CR152_13970 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CR152_13970 (lpdA)
   00620 Pyruvate metabolism
    CR152_13970 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CR152_13970 (lpdA)
   00640 Propanoate metabolism
    CR152_13970 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CR152_13970 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CR152_13970 (lpdA)
   00310 Lysine degradation
    CR152_13970 (lpdA)
   00380 Tryptophan metabolism
    CR152_13970 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CR152_13970 (lpdA)
   00670 One carbon pool by folate
    CR152_13970 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mass04147]
    CR152_13970 (lpdA)
Enzymes [BR:mass01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CR152_13970 (lpdA)
Exosome [BR:mass04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CR152_13970 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox GIDA Pyr_redox_3 FAD_oxidored AlaDh_PNT_C NAD_binding_8 GCV_H Biotin_lipoyl_2 RnfC_N 3HCDH_N DEC-1_N FAD_binding_3 HI0933_like
Other DBs
NCBI-ProteinID: ATQ75504
UniProt: A0A2D2DKJ3
LinkDB
Position
3113517..3115340
AA seq 607 aa
MSTIEVKVPNIGDFKEVEVIEVMIKVGDTIKVDQSLITVESDKASMEIPASHAGVVKEIK
VKVGDKIAEGSMLLVLDEAGGAAAAPAAAAPAAAAPAPAAADRAESQAPAHPTPPAAPSA
AAPAPAMAKYDGKVDIECEMMVLGAGPGGYSAAFRSADLGMNTVLIERYASLGGVCLNVG
CIPSKALLHVAAVIDETQAMSKHGISFAKPDIDIDQLRAYKDKVITKMTTGLAGMAKMRK
VNVVQGVGQFVSANHIEVTAADGSKKIVQFQKAIIAAGSAVVNLPFVPKDPRIVDSTGAL
ELRQIPKRMLVIGGGIIGLEMATVYSTLGARIDVVEMLDGLMQGADRDMVKVWQKFNEKR
FDKVMTKTKTVAVEALEEGIKVTFEAAEAGVTAPEPQIYDMVLVAVGRSPNGGKIAAAKA
GVTVTDRGFIPVDAQMRTNVPHIFAIGDLVGQPMLAHKAVHEAHVAAEAAHGEKAFFDVK
VIPSVAYTDPEVAWVGITEDEAKAKGIKLEKGHFPWAASGRAVANGRDEGFTKLLFDAET
HRIVGGGIVGTHAGDMIGEIALAIEMGADGIDIAKTIHPHPTLGESIGMAAEVYEGVCTD
LPPVRKK
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgagcacaatcgaggtaaaagtaccgaatatcggcgacttcaaggaagttgaagtcatt
gaagtgatgatcaaggtgggcgacacgatcaaggtcgaccagtccctgatcaccgtcgaa
tccgacaaggccagcatggaaatcccggccagccatgccggcgtggtcaaggaaatcaag
gtcaaggtgggcgacaagatcgccgaaggctcgatgctgctggtgctcgacgaagccggc
ggcgccgcggcggctcctgcggcggcagcacctgccgcagcggctccggcgccggcggcg
gccgaccgggccgaatcgcaggcgcctgcgcatccgacgccgccagcggccccaagcgcg
gcagcgccagcgccggccatggccaagtacgacggcaaggtcgacatcgaatgcgagatg
atggtgctgggcgcgggtcccggcggctattccgcggcgttccgttcggccgacctgggc
atgaacaccgtgctgatcgagcgttacgcgtcgctgggcggcgtgtgcctgaacgtcggc
tgcattccatcgaaagcgctgctgcacgtggccgccgtgatcgatgaaacgcaagccatg
tccaagcacggcatcagcttcgccaagccggacatcgacatcgaccagctgcgcgcctac
aaggacaaggtcatcaccaagatgaccaccggtctggcgggcatggccaagatgcgcaag
gtgaatgtggtgcagggcgtcggccagttcgtcagcgccaatcacatcgaagtgaccgcc
gccgacggcagcaagaagatcgtgcagttccagaaggcgatcatcgccgccggttcggcc
gtggtcaacctgccgttcgtgccgaaagatccgcgcatcgtcgattcgaccggcgcgctg
gaactgcgccagatcccgaaacgcatgctggttatcggcggcggcatcatcggcctggaa
atggcgacggtgtactcgaccctcggtgcgcgcatcgatgtcgtcgagatgctcgatggc
ctgatgcagggcgccgaccgcgacatggtcaaggtctggcaaaagttcaacgagaagcgc
ttcgacaaggtcatgaccaagaccaagacggttgccgtggaagcgctggaagagggcatc
aaggtcacgtttgaagcggcggaagccggcgtcaccgcgcccgagccgcagatctacgac
atggtgctggtggccgttggccgcagcccgaacggcggcaagatcgcggccgccaaggcc
ggcgtgacggtcaccgaccgtggtttcattccggtcgacgcgcagatgcgcaccaacgtg
ccgcacattttcgccatcggcgatctggtgggccagccgatgctggcgcacaaggcggtg
catgaagcgcacgtcgccgccgaagcggcgcatggcgagaaggccttcttcgacgtcaag
gtgattccatcggtggcctacaccgatcccgaagtggcatgggtcggcattaccgaagac
gaggcgaaagccaagggcatcaagctggagaagggccacttcccgtgggccgcaagcggc
cgcgcggttgccaatggccgcgacgagggcttcaccaagctgctgttcgacgccgagacg
caccggattgtcggtggcggcatcgtcggcacgcatgcgggcgacatgatcggcgaaatc
gcgctggcgatcgagatgggtgccgatggcatcgatatcgccaagacgatccacccgcat
ccgaccctgggcgagtcgatcggcatggcggcggaagtgtatgaaggcgtgtgcacggac
ttgccgccggtgcgcaagaagtaa

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