KEGG   Massilia violaceinigra: CR152_16230
Entry
CR152_16230       CDS       T05157                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mass  Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:mass00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mass03400]
    CR152_16230
Enzymes [BR:mass01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CR152_16230
    5.6.2.6  RNA 3'-5' helicase
     CR152_16230
DNA repair and recombination proteins [BR:mass03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CR152_16230
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ATQ75906
UniProt: A0A2D2DLQ4
LinkDB
Position
3647536..3650010
AA seq 824 aa
MSKSQMARAIDDWFVQRKWKVFPFQRAVWRAALAGESGLLHANTGAGKTYAVWLAALLRG
ALAGKRKASGLRVLWITPMRALAADTQRALEEAKAVLAPGWTVGARTGDTSSSERARQSR
AMPSALITTPESLSLLLSHAAAQTQFASLDMIIIDEWHELMGSKRGVQVQLALARLRHWN
PQLVVWGLSATMGNLAQAQDVLLGEGKGTLVEGDLKKEIRVDTLIPANVSRFPWGGHLGI
AMLQPVINEIEAYNATLVFTNTRSQSELWYQNILEARPDWAGVIALHHGSLDREVREWVE
NGLKKGELKAVICTASLDLGVDFLPVERVLQIGSAKGIARLLQRAGRSGHAPGRVSRVTL
VPTNSLELLEAAGAKHAVAARRIEGRLVPNKPFDVLVQHLVTVALGGGFRSEQLYEEVRS
AWSYRALSPEEWQWALDFVARGGQSLIAYPEYQRVIADDEGVNRVPSVALGRRHRMGIGT
IVSDSTMQVKYMSGGRIGSVEESFISRLKAGDHFLFGGRILEFVRVHEMTAFVKRATGAR
GAVTRWQGAKMPMSSELAHAALEELRHAAQSEFRGPEMEAIRPLLEIQQRWSALPTIDTL
VVEAMTSREGYHLFMYPFAGRSVHMGLASLFAYRIARVQPITFSIAINDYGFELLAAEPV
DWARAFLAASENVTGLEVPLFSTELLLEDVLASLNATQLSQQRFREVARIAGLVFQGYPG
QPKSTRQIQASSSLFFEVFRKHDAANLLLTQAQREVMEQELELTRLRDTLIELHGRGVAF
REVKRATPFGFALMVERFREKLSTEKLSDRVGRMLRELEKAAVP
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgagcaagagccagatggcgcgcgccatcgacgactggttcgtccagcgcaaatggaag
gtgttcccgttccagcgcgcggtgtggcgcgccgcgctggccggcgaatcgggcctgctg
cacgcgaacacgggcgcgggcaagacctatgcggtgtggctggcggcgctgctgcgcggc
gcgctggccggcaagcgcaaggcgtccggcctgcgcgtgctgtggattacgccgatgcgc
gcgctggccgccgatacccagcgcgcactggaggaggcgaaggcggtgctggcgcccggc
tggacggtcggcgcgcgcaccggcgacaccagctcaagcgagcgcgcgcgccagtcgcgc
gcgatgccgtcggcgctcatcaccacgcccgaaagcctgtcgctgctgctcagccacgcg
gcggcgcagacccagttcgccagcctggacatgatcatcatcgacgagtggcatgaactc
atgggcagcaagcgcggggtgcaggtgcagctggcgctggcccgcctgcgccactggaac
ccgcaactggtggtgtggggcttgtcggccacgatgggcaacctggcgcaggcgcaggac
gtgctgctcggcgaagggaagggcacgctggtcgaaggcgacctgaaaaaggagatccgg
gtcgataccctgatccccgccaacgtgtcgcgctttccgtggggcgggcaccttggcatc
gccatgctgcagccggtgatcaacgagatcgaggcatacaacgccacgctggtatttacc
aatacccgctcgcagtcggagctgtggtaccagaatatcctggaggcgcgcccggactgg
gccggcgtgatcgcgctgcatcacggctcgctcgaccgcgaagtgcgggagtgggtcgaa
aatgggctgaaaaaaggtgagctcaaagcggtgatctgcaccgccagcctcgatctggga
gtggacttcctgccggtcgaacgggtgctgcagatcgggagcgccaagggcatcgcgcgc
ttgcttcaacgggcggggcgcagcggccacgcgccggggcgcgtctcgcgcgtgacgctg
gtgcccaccaacagcctggaattgctggaagcggccggcgccaagcacgccgtcgcggcg
cgccgcatcgaagggcgcctggtgcccaacaagccgttcgacgtgctggtgcagcatctg
gtgacggtggcgctgggcggcggttttcgctccgaacagctgtacgaagaagtgcgcagc
gcctggtcgtaccgcgcgctctcgcccgaagagtggcagtgggcgctcgatttcgtggcg
cgcggcgggcaaagcctgatcgcgtatccggaataccagcgcgtcattgccgacgacgag
ggcgtgaaccgcgtgccgagcgtggcgctggggcggcgccaccgtatgggcatcggcacc
atcgtgtccgattcgacgatgcaggtgaagtacatgagcggggggcgcatcggcagcgtc
gaggaatcgttcatctcgcgcctgaaggcgggcgatcatttcctgttcggcgggcgcatc
ctggaattcgtgcgagtgcacgagatgaccgcgtttgtgaagcgcgcgaccggtgcgcgc
ggggcggtgacgcgctggcagggcgccaagatgccgatgtcgtcggaactggcgcacgcc
gcgctggaagaattgcgccacgcggcgcagagcgaattccgcggcccggaaatggaggcg
atccgcccgctgctggaaatccagcagcgctggtccgcgctgccgaccatcgataccctg
gtggtggaggccatgaccagccgcgagggctatcacctgttcatgtatccgttcgcggga
cgctcggtgcacatgggactggcctcgctgttcgcgtaccggatcgcgcgcgtgcagccg
attacgttttcgattgcgatcaacgattatggcttcgagctgctggcggccgaaccggtg
gactgggcgcgcgcctttttggccgcgtccgagaacgtgacggggcttgaggtgccgctg
ttctcgaccgaactgctgctcgaagacgtgctggcgagcctgaacgcgacccagctctcg
cagcagcgcttccgcgaagtggcgcgcatcgccgggctggtgttccaggggtatccgggc
cagccgaaaagcacgcgccagatccaggcctcgtcgtcgctgtttttcgaggtgttccgc
aagcacgatgcggctaacctgctgctcacgcaggcgcagcgcgaagtgatggagcaggag
ctggaattgacgcgcctgcgcgataccttgatcgagctgcacgggcgcggcgtggccttc
cgcgaagtcaaacgcgccacgccgttcggctttgcgctgatggtcgagcgcttccgcgaa
aaactcagtactgaaaaactgtcggaccgcgtcgggcgcatgctgcgcgaactggagaaa
gcggccgtgccatga

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