KEGG   Massilia violaceinigra: CR152_17055
Entry
CR152_17055       CDS       T05157                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mass  Massilia violaceinigra
Pathway
mass00010  Glycolysis / Gluconeogenesis
mass00020  Citrate cycle (TCA cycle)
mass00260  Glycine, serine and threonine metabolism
mass00280  Valine, leucine and isoleucine degradation
mass00310  Lysine degradation
mass00380  Tryptophan metabolism
mass00620  Pyruvate metabolism
mass00630  Glyoxylate and dicarboxylate metabolism
mass00640  Propanoate metabolism
mass00670  One carbon pool by folate
mass00785  Lipoic acid metabolism
mass01100  Metabolic pathways
mass01110  Biosynthesis of secondary metabolites
mass01120  Microbial metabolism in diverse environments
mass01200  Carbon metabolism
mass01210  2-Oxocarboxylic acid metabolism
mass01240  Biosynthesis of cofactors
Module
mass_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mass_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mass_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mass_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mass00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CR152_17055 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CR152_17055 (lpdA)
   00620 Pyruvate metabolism
    CR152_17055 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CR152_17055 (lpdA)
   00640 Propanoate metabolism
    CR152_17055 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CR152_17055 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CR152_17055 (lpdA)
   00310 Lysine degradation
    CR152_17055 (lpdA)
   00380 Tryptophan metabolism
    CR152_17055 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CR152_17055 (lpdA)
   00670 One carbon pool by folate
    CR152_17055 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mass04147]
    CR152_17055 (lpdA)
Enzymes [BR:mass01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CR152_17055 (lpdA)
Exosome [BR:mass04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CR152_17055 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C Pyr_redox_3 HI0933_like FAD_oxidored GIDA FAD_binding_2 NAD_binding_8 FAD_binding_3 Thi4 2-Hacid_dh_C DAO 3HCDH_N UDPG_MGDP_dh_N Lycopene_cycl
Other DBs
NCBI-ProteinID: ATQ76054
UniProt: A0A2D2DM45
LinkDB
Position
3835407..3836840
AA seq 477 aa
MSDAKQFDVVVIGAGPGGYIAAIRAAQLGFKVACIDEWANAKGGPAPGGTCTNVGCIPSK
ALLQSSEHYEHAGHAFAEHGIDFAGLSLNLPQMLKRKETVVKQNNDGILFLFKKNKITFF
HGRGAFTGAAEGGYQISVTGANADTLSAKHVVIATGSNARELPGAPFDEKLILSNSGALT
ISSVPSTLGVIGAGVIGLEMGSVWRRLGAKVTVLEGLPTFLGAVDEQIAKEAHKLFTKQG
LEINLGVKISKVTAGENSVTVDYANAAGEAQSAVFDKLIISIGRVPNTIGLGADAVGLKL
DERGFIAVDDDCKTNLPNVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHTNFNTIPW
VIYTSPEIAWVGQNEQQLKAAGVAYKAGTFPFMANGRARALGDTSGMVKFLADATTDEIL
GVHIVGPMASELISEAVVAMEFRASAEDIARICHAHPSLSEATKEAALAVDKRSLNF
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagtgatgcaaaacaattcgacgtggtcgtcatcggcgctggccctggcggctacatc
gccgccatccgcgcggcgcaactgggtttcaaggttgcctgtatcgatgaatgggccaac
gccaagggcggtcccgctccgggcggcacctgcaccaacgtcggctgcattccatcgaaa
gcgctgctgcagtcgtccgagcactacgaacacgccggccatgcgttcgccgagcacggc
atcgatttcgccggcctgtcgctgaacctgccgcagatgttgaagcgcaaggaaaccgtc
gtcaaacagaacaacgacggcatcctgttcctgttcaagaaaaacaagatcaccttcttc
cacggccgcggtgcgttcaccggcgccgctgaaggcggttaccagatcagcgtcaccggc
gccaatgccgacacgctctcggccaagcacgtcgtcatcgcgaccggttccaacgcccgt
gaactgccgggcgcaccgttcgatgaaaaactgatcctgtcgaacagcggcgcgctgacc
atcagctccgtgccgtccaccctcggcgtgatcggcgccggcgtgatcggcctggaaatg
ggcagcgtctggcgccgcctcggcgccaaggtcacggtgctggaaggcttgccgacgttc
ctgggcgcggtcgacgagcagatcgccaaggaagcgcacaagctgttcaccaagcagggc
ctggagatcaacctgggcgtgaagatcagcaaggtcaccgccggcgagaacagcgtcacc
gtcgattacgccaacgccgccggcgaagcgcagagcgccgtgttcgacaaactgatcatc
tcgatcggccgcgtgccgaacaccatcggcctgggtgccgacgcggttggcctgaagctc
gacgagcgcggcttcatcgccgtcgacgacgactgcaagaccaatctgccgaacgtgtgg
gcggtgggcgacgtggtgcgcggcccgatgctggcgcacaaggccgaggaagaaggcgtt
gccgtggccgagcgtatcgccggccagcatggccacaccaacttcaacacgattccgtgg
gtgatctacacctcgccggaaatcgcgtgggtcggccagaacgagcagcagctcaaagcg
gccggcgtggcctacaaggcaggcactttcccgttcatggccaatggccgtgcgcgtgcg
ctgggcgatacgtccggcatggtcaaattcctggccgatgcgaccaccgatgaaatcctc
ggcgtgcatatcgtcggcccgatggcgtccgaactgatttcggaagccgtcgtcgcgatg
gaattccgcgcttcggccgaagacattgcgcgcatctgccacgcccacccatcgctgtcc
gaagcgaccaaggaagccgcgctcgccgtcgacaagcggtcgctgaacttctaa

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