Massilia violaceinigra: CR152_17055
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Entry
CR152_17055 CDS
T05157
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mass
Massilia violaceinigra
Pathway
mass00010
Glycolysis / Gluconeogenesis
mass00020
Citrate cycle (TCA cycle)
mass00260
Glycine, serine and threonine metabolism
mass00280
Valine, leucine and isoleucine degradation
mass00310
Lysine degradation
mass00380
Tryptophan metabolism
mass00620
Pyruvate metabolism
mass00630
Glyoxylate and dicarboxylate metabolism
mass00640
Propanoate metabolism
mass00670
One carbon pool by folate
mass00785
Lipoic acid metabolism
mass01100
Metabolic pathways
mass01110
Biosynthesis of secondary metabolites
mass01120
Microbial metabolism in diverse environments
mass01200
Carbon metabolism
mass01210
2-Oxocarboxylic acid metabolism
mass01240
Biosynthesis of cofactors
Module
mass_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mass_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mass_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mass_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CR152_17055 (lpdA)
00020 Citrate cycle (TCA cycle)
CR152_17055 (lpdA)
00620 Pyruvate metabolism
CR152_17055 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CR152_17055 (lpdA)
00640 Propanoate metabolism
CR152_17055 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CR152_17055 (lpdA)
00280 Valine, leucine and isoleucine degradation
CR152_17055 (lpdA)
00310 Lysine degradation
CR152_17055 (lpdA)
00380 Tryptophan metabolism
CR152_17055 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CR152_17055 (lpdA)
00670 One carbon pool by folate
CR152_17055 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mass04147
]
CR152_17055 (lpdA)
Enzymes [BR:
mass01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CR152_17055 (lpdA)
Exosome [BR:
mass04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CR152_17055 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
Pyr_redox_3
HI0933_like
FAD_oxidored
GIDA
FAD_binding_2
NAD_binding_8
FAD_binding_3
Thi4
2-Hacid_dh_C
DAO
3HCDH_N
UDPG_MGDP_dh_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ATQ76054
UniProt:
A0A2D2DM45
LinkDB
All DBs
Position
3835407..3836840
Genome browser
AA seq
477 aa
AA seq
DB search
MSDAKQFDVVVIGAGPGGYIAAIRAAQLGFKVACIDEWANAKGGPAPGGTCTNVGCIPSK
ALLQSSEHYEHAGHAFAEHGIDFAGLSLNLPQMLKRKETVVKQNNDGILFLFKKNKITFF
HGRGAFTGAAEGGYQISVTGANADTLSAKHVVIATGSNARELPGAPFDEKLILSNSGALT
ISSVPSTLGVIGAGVIGLEMGSVWRRLGAKVTVLEGLPTFLGAVDEQIAKEAHKLFTKQG
LEINLGVKISKVTAGENSVTVDYANAAGEAQSAVFDKLIISIGRVPNTIGLGADAVGLKL
DERGFIAVDDDCKTNLPNVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHTNFNTIPW
VIYTSPEIAWVGQNEQQLKAAGVAYKAGTFPFMANGRARALGDTSGMVKFLADATTDEIL
GVHIVGPMASELISEAVVAMEFRASAEDIARICHAHPSLSEATKEAALAVDKRSLNF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcaaaacaattcgacgtggtcgtcatcggcgctggccctggcggctacatc
gccgccatccgcgcggcgcaactgggtttcaaggttgcctgtatcgatgaatgggccaac
gccaagggcggtcccgctccgggcggcacctgcaccaacgtcggctgcattccatcgaaa
gcgctgctgcagtcgtccgagcactacgaacacgccggccatgcgttcgccgagcacggc
atcgatttcgccggcctgtcgctgaacctgccgcagatgttgaagcgcaaggaaaccgtc
gtcaaacagaacaacgacggcatcctgttcctgttcaagaaaaacaagatcaccttcttc
cacggccgcggtgcgttcaccggcgccgctgaaggcggttaccagatcagcgtcaccggc
gccaatgccgacacgctctcggccaagcacgtcgtcatcgcgaccggttccaacgcccgt
gaactgccgggcgcaccgttcgatgaaaaactgatcctgtcgaacagcggcgcgctgacc
atcagctccgtgccgtccaccctcggcgtgatcggcgccggcgtgatcggcctggaaatg
ggcagcgtctggcgccgcctcggcgccaaggtcacggtgctggaaggcttgccgacgttc
ctgggcgcggtcgacgagcagatcgccaaggaagcgcacaagctgttcaccaagcagggc
ctggagatcaacctgggcgtgaagatcagcaaggtcaccgccggcgagaacagcgtcacc
gtcgattacgccaacgccgccggcgaagcgcagagcgccgtgttcgacaaactgatcatc
tcgatcggccgcgtgccgaacaccatcggcctgggtgccgacgcggttggcctgaagctc
gacgagcgcggcttcatcgccgtcgacgacgactgcaagaccaatctgccgaacgtgtgg
gcggtgggcgacgtggtgcgcggcccgatgctggcgcacaaggccgaggaagaaggcgtt
gccgtggccgagcgtatcgccggccagcatggccacaccaacttcaacacgattccgtgg
gtgatctacacctcgccggaaatcgcgtgggtcggccagaacgagcagcagctcaaagcg
gccggcgtggcctacaaggcaggcactttcccgttcatggccaatggccgtgcgcgtgcg
ctgggcgatacgtccggcatggtcaaattcctggccgatgcgaccaccgatgaaatcctc
ggcgtgcatatcgtcggcccgatggcgtccgaactgatttcggaagccgtcgtcgcgatg
gaattccgcgcttcggccgaagacattgcgcgcatctgccacgcccacccatcgctgtcc
gaagcgaccaaggaagccgcgctcgccgtcgacaagcggtcgctgaacttctaa
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