Massilia violaceinigra: CR152_17395
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Entry
CR152_17395 CDS
T05157
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mass
Massilia violaceinigra
Pathway
mass03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CR152_17395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mass03400
]
CR152_17395
Enzymes [BR:
mass01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CR152_17395
DNA repair and recombination proteins [BR:
mass03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CR152_17395
Prokaryotic type
CR152_17395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_SHLD2_2nd
Motif
Other DBs
NCBI-ProteinID:
ATQ76107
UniProt:
A0A2D2DM96
LinkDB
All DBs
Position
3910085..3910861
Genome browser
AA seq
258 aa
AA seq
DB search
MSVQPIPPAILDAVSRADPSWQPVLRQGLEAVMRAEPLYLPTLAADTYLPTEQRLFAAFA
LPLDQVRYVLVGEGPYPRAESATGVCFMDGAVGKLWCESGLSKPVNKATSLRNFMKMLLV
ADGQLPAGDTGGAAMAPVAAAAANNGSIQTLAELQHNLTQQGFLLLNASLVFRSHVAPVI
DARAWLPFLQTVMAALAAREQAPTLVLWGKIAEQLQKLQETKSFPQLSSEHPYNLSFIQH
AGMQALFGPMHLLRAPSL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccaacctattcctcccgccatcctcgacgccgtctcacgcgcggacccatcc
tggcagccggtcctgcgccagggactggaagcggtcatgcgcgccgagcccctgtacctg
ccgacccttgccgccgacacctatctcccgacggaacagcgcctgttcgccgccttcgcc
ctgccgctcgaccaggtgcgctacgtgctggtgggcgaggggccgtacccgcgcgccgag
agcgccaccggcgtttgcttcatggatggggctgtcggcaagctgtggtgcgagagcggg
ctctccaagccggtcaacaaggcgacctcgctgcgcaatttcatgaagatgctgctggtg
gccgatgggcagctgccggccggcgacaccggcggtgccgccatggccccggtggcggca
gcggcagcgaacaacggcagcatccagaccctggccgagttgcagcacaatctgacgcag
caagggtttctgctgctcaatgcctcgctggtgttccgttcccatgtcgcgccggtgatc
gatgcgcgcgcctggctgccgttcctgcaaacggtcatggcggcgctggccgcccgggaa
caggcgccgaccctggttttatggggcaagattgcggaacaactacaaaaattgcaggaa
accaagagttttccgcagctgagctccgagcatccgtataatttgtcatttatccagcat
gccggcatgcaagccctgttcgggccgatgcacttgttgcgcgcccctagcctgtga
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