Massilia violaceinigra: CR152_17545
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Entry
CR152_17545 CDS
T05157
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mass
Massilia violaceinigra
Pathway
mass03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CR152_17545 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mass03019
]
CR152_17545 (pnp)
03016 Transfer RNA biogenesis [BR:
mass03016
]
CR152_17545 (pnp)
Enzymes [BR:
mass01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CR152_17545 (pnp)
Messenger RNA biogenesis [BR:
mass03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CR152_17545 (pnp)
Transfer RNA biogenesis [BR:
mass03016
]
Prokaryotic type
tRNA degradation factors
CR152_17545 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
Peptidase_M9_N
KH_KhpA-B
OB_RRP5_4th
DUF5813
LodA_N
KH-I_KHDC4-BBP
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ATQ76135
UniProt:
A0A2D2DMC6
LinkDB
All DBs
Position
3937445..3939562
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AA seq
705 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVMVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQIIIHVLSV
NPEIDPDIAAMIGASAALCVSGIPFSGPIGAARVGYANGQFILNPTTTQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEIMLGAVVYGHDQMKVVIDAIHELVRDGGKPEVEWTAPAKNE
ALIARVKELAETNINETYQIKDKVARTAKLKASFQEVYAALAADAAATGIPQPDNVDVGN
VLFDIEAKVVRSQILNGEPRIDGRDTRTVRPIAIRTSILPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEYTDDFMMHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PNPEDFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTANGITALQMDIKIMGITKEIMQVALAQAKEGRQHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGIV
TIASVDAAAGQEAKRRIEELTASVEVGKTYDGVVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQAVRVKVLETDDRGRLKLSMKAAEGAEAAPQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaagttacgaaaaccttccagtacggccaacatcaagttaccctggaaacc
ggcgaaatcgcccgtcaagcctccggcgccgtcatggtgtcgatcgaagacaccgttgtc
ctggctaccgtggttgcgcgcaaagacgccaagccaggccaggatttcttcccgctgacg
gtcgattacgtcgagaaaacgtacgcagccggtaaaatcccaggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgaccagccgcctgatcgaccgtccgatccgc
ccgctgttcccagaaggctacctgaacgaagttcagatcatcatccacgtgctgtcggtc
aatcctgagatcgatccggacatcgccgccatgatcggcgcttcggctgccctgtgcgtc
tccggcatcccgttcagcggcccgatcggcgccgcgcgcgtcggctacgccaacggccag
ttcatcctgaacccgaccaccacacagctcaagacatccgagatggacctggtcgttgcc
ggtaccgaaaccgccgtgctgatggtcgaatccgaagccaagcaactgtccgaagaaatc
atgctcggcgccgtggtctacggccatgaccagatgaaagtcgtgatcgatgcgatccac
gaactggtacgcgacggcggcaagccggaagtcgaatggaccgctcccgccaagaacgaa
gcgctgatcgcccgcgtcaaggaactggctgaaacgaacatcaacgaaacctaccagatc
aaggacaaggttgcccgtaccgccaagctgaaagcatcgttccaggaagtctacgccgcc
ctggccgctgacgctgccgccaccggcataccgcagccggacaatgtcgatgtcggcaac
gtcctgttcgacatcgaagccaaagtcgtgcgttcgcagatcctcaatggcgagccacgc
atcgacggccgcgacacccgcaccgtgcgtccgatcgcgatccgcaccagcatcctgcca
cgcacccacggttcggccctgttcacccgcggcgaaacgcaagcgctggtcgtcgctacc
ctcggcaccgcgcgcgacagccagaagatcgatgcgctgatgggcgagtacaccgatgac
ttcatgatgcactacaacatgcctccgttcgccaccggcgaaaccggccgtgtcggtacc
ccgaagcgtcgcgaaatcggccacggccgcctggccaagcgcgcgctgatcgccgccttg
cccaaccctgaagacttcagctactcggtgcgcctggtatcggaaatcaccgaatcgaac
ggttcctcgtcgatggcttccgtctgcggcggctgcctggcgctgatggatgccggcgtg
ccgatgaaagcgcacgtggccggtatcgccatgggcctgatcaaggaaggcggcaagttc
gccgtcctgtccgacattctgggcgacgaagatcacctgggcgacatggacttcaaggta
gccggtaccgccaatggcattaccgcgctgcagatggacatcaagatcatgggcatcacc
aaggaaatcatgcaagtggcactggcgcaagccaaagaaggccgccagcacatcctcggc
gaaatgcagaaagccatgccgcacgtgaaaaccgaactgtcggatttcgcaccgcgcctg
atcaccatcaagatcaatcctgagaaaatccgtgacgtcatcggcaagggcggcgcagtc
attcgcgcgctgaccgaagaaaccggcacccagatcgacatcagcgacgaaggtatcgtc
accatcgcgtcggtcgacgctgccgccggccaggaagccaagcgccgcatcgaagaactg
accgcgtcggtcgaagtgggcaagacctacgacggcgtcgtgctcaagctgctggacttc
ggcgcgatcgtccaggtcatgccaggcaaggacggcctgctgcacatctcgcagatcgcc
aacgagcgtgtgaacgcggttgccgactacctgaaagaaggccaggcagtgcgcgtcaag
gtcctcgagaccgacgaccgcggccgcctcaagctgtcgatgaaagctgctgaaggcgcg
gaagcggctcctcagtaa
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