KEGG   Massilia violaceinigra: CR152_19045
Entry
CR152_19045       CDS       T05157                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
mass  Massilia violaceinigra
Pathway
mass03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mass00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CR152_19045 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mass02044]
    CR152_19045 (icmF)
Secretion system [BR:mass02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CR152_19045 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: ATQ76391
UniProt: A0A2D2DN62
LinkDB
Position
complement(4291832..4295458)
AA seq 1208 aa
MNLVMNLFGRVAGVVFGRQLWIFSGLLALCCMVWLLGPIIAIGQMRPLESELARWCVIGL
VFAIWLLRALYRNWRAARLNSQLLTQIRTPAARPNAAPSAANPHLDELSQRFQDASEKLR
TARFATDGGQGKLAFLQRFSGQYLYQLPWYVFIGAPGSGKTTALVNAGLEFPLAEQFGKA
AIRGIGGTRNCDWWFTNEAVLIDTAGRYTMQESNREHDQGEWQGFVDLLKKFRPRQPLNG
AILTISIADLLSSGEQERALHALTLRKRLHELRDQLGIQFPVYVLITKVDLLAGFTEYFA
QLSKEQRSQVWGLTFKLDAVRDSSFDVPGAFSAQYKQLLERLYASLPEQLLAEHDPRQRE
LAYLLPQEFAGLEGILSQFLAHVFVSSKFESNALLRGVYFTSGTQEGTVFDRVLGGIKNF
LQINTGQRSPQIGEPGRSFFLRSLLQDIIFKEAGLAGINERWQKKQTWLRTAGYAATALL
AVAVSLAWLNSYRANQAYVNDVAARLPALEKRLGAVKLSDREQITTVMPMLDALHAVPVS
TVLDVDSPALGYQLGLYQGGKLQAASTRAYERALDDMFLPQLARRLEDSLRQAPSGDVEL
SYNALKAYLMLFDPAHYDADFLQAWLSLDLERQLGNALSNVQRDELRAHLKRLLAQRIVA
SPFALDEPLVAQTRERLLTHTLAQRAYGTMKRILQGNKQLPTFNVGAVVGPQAPLVFRRA
SGGSLNQGVAGLYTYRGYWELFAPGLDARVAKLAEEEKWVLAQPKSAPASADNLAAWSAE
VRRLYLTDYIRVWEDYLGDLRLKTGGTLAQNIQVARILSSTDSPLVRLMNAAARETTLVR
LDEINGATIVDKARDKLDSTRSSLSQIFGHNDLTSGKPETAAAERVEMLVDTRFAALREF
TTARDKGAKAPIEGIVETLGELYAQLTATETALRGGVTPPPNQVVSKILAEAGRLPTPFR
GMLGELANSSDNNVTQVLQQQLGKNVAANVGHYCRQSVAGRYPFVRASSRDMALGDFAQI
FAPGALMDEFFQKNLANQVDTAARPWRFKGEQKARAGYLDSFEQAVVIRDVYFAGGARTP
SIRLDIKPVQMDASIAQFVIDIDGQAVRYAHGPQVSTPVQWPGPAGRNQVRVQVTGSNGS
SGSLMTEGAWALHRMFDRASLAPQRDAEKMLATFDVNGAKAVFEVTASSAHNPFRLAQLA
SFSCPGGV
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgaatcttgttatgaacctgttcggcagagtggccggtgtcgtcttcggtcgtcagctg
tggatattttctggcctgcttgccttgtgctgcatggtgtggctgctcggcccgatcatc
gccatcggccagatgcgcccgctggagagcgaactggcgcgctggtgcgtgatcggcctg
gtgtttgccatctggctgctgcgcgcgctgtaccgcaactggcgcgcggcccgcctgaac
tcccagctgctgacgcaaatccgcacgcccgccgcacgccccaatgccgcaccaagcgcc
gccaacccgcacctggatgaactgagccagcgctttcaggacgcgtccgagaaactacgc
acggccaggtttgccaccgacggcggtcagggcaagctggctttcctgcagcggttctcg
ggccagtatctgtatcagctaccgtggtacgtcttcatcggcgcgcccggctcgggcaag
accacggcgctggtcaatgcgggcctggaattcccgctggctgaacaatttggcaaggca
gccattcgcggcatcggcggcacccgcaactgcgactggtggttcaccaatgaagcggtg
ctgatcgacacggccggccgctacaccatgcaagagagtaatcgtgaacacgatcagggc
gaatggcagggttttgtcgacctcctcaaaaagttccggccgcgccagccgctgaacggc
gccattctcaccatcagcatcgccgatctgctcagcagcggcgagcaggaacgcgcactg
catgcgctcaccttgcgcaagcgcctgcacgaactacgcgatcagctcggtattcaattc
ccggtctacgtcctgatcaccaaggtcgatctgctggccggttttaccgaatattttgcc
caactgagcaaggaacagcgcagccaggtatggggcctgaccttcaagctggacgccgtg
cgcgatagcagcttcgatgtgcccggcgctttttcagcacagtataagcaactgctggaa
cgcctgtacgccagcctgcccgagcagctgctggccgaacacgacccgcgccagcgcgaa
ctggcctacctgctgccgcaggaatttgccgggctggagggtatcctgagccagttcctg
gcgcacgtctttgtctcgtcgaaattcgagtcgaacgccttgctgcgcggcgtgtacttt
accagcggcacccaggaaggcaccgtgttcgaccgggtcctcggcggcatcaagaacttc
ttgcagatcaataccggccagcgttcgccgcagatcggcgaacccggccgcagtttcttt
ctgcgcagcctattgcaagacatcattttcaaggaagcgggcctggctggcatcaatgaa
cgctggcagaagaagcaaacctggctgcgcacagccggttatgccgccaccgccctgctg
gcggtcgcggtctcgctcgcatggctgaacagctaccgcgccaaccaggcttacgtcaac
gatgtcgcagcgcgtctgccagcgcttgaaaaacgcctcggcgcagtaaagctgagcgac
cgtgaacagatcaccaccgtcatgccgatgctcgacgccttgcacgccgtgcccgtcagc
acggtgctcgacgtggacagtccagcgctgggttaccagctcggcctgtatcagggcggc
aagctgcaggctgcgtccacccgcgcttacgaacgggcgctggatgacatgtttctgccg
caactggcacgccgcctggaagacagcctgcgccaggccccgagcggcgacgtcgaactg
agctacaacgcgctcaaggcgtatctgatgctgttcgacccggcgcattacgacgccgat
tttcttcaagcgtggttgtcgctggacctggaacgtcaattgggcaacgccctctcgaac
gtccagcgcgacgaactgcgcgcccatctgaagcgcttgcttgcgcaacggattgttgcg
tcgccgttcgcgctagacgagccactggtggcgcaaacgcgtgaacggctgctgacgcat
accctggcccagcgcgcctacggcaccatgaagcgcatactgcaaggcaacaagcaactg
ccaacgttcaatgtcggcgccgtggtcggtccccaggccccgctggtgtttcgccgcgcc
agtggcggcagcctgaatcagggcgtggccggcttgtacacctatcgcggttactgggaa
ctgttcgctcccggcctggacgcgcgcgtcgccaagctggcggaagaagagaaatgggtc
ctggcccagccaaaaagcgcgccagcgagcgccgataacctggccgcgtggagcgccgag
gtaagacgcctgtacctgaccgactacattcgcgtgtgggaagactatctgggcgacctg
cgcctgaagaccggcggcaccctggcccagaatatccaggtcgcgcgcatcctgtcgtcc
accgactcgccactggtgcgcctgatgaacgccgcggcaagggaaacgacactggtgcgc
cttgatgagatcaacggcgccaccatcgtcgacaaggcccgcgacaaactcgacagcacg
cgctcatccctgagccagatctttggccacaacgacctaaccagcggcaagccggagacg
gccgccgcggaacgcgtggaaatgctggtcgatacgcgtttcgccgcgctgcgcgaattt
acgacagcgcgcgacaaaggcgccaaggcgccaatcgaaggcattgtcgagaccctgggc
gagctgtacgcccagttgaccgcaaccgaaaccgccctgcgcggcggcgtaactccgcca
ccgaatcaggtggtcagcaaaattctggccgaagccggccgcctgccgacgccgtttcgc
ggcatgctgggcgaactggccaattcctccgataacaatgtgacccaggtactgcaacag
cagcttggcaagaatgttgccgccaacgtgggccactactgccggcaaagcgtggctggc
cgctacccgttcgtgcgcgcctcctcgcgtgacatggcgcttggcgactttgcccagatc
tttgcgcccggcgccctgatggacgagtttttccagaagaacctggcaaaccaggttgac
acggcggcgcggccatggcgcttcaagggcgaacagaaggcccgtgccggctacctcgat
tcctttgagcaggcagtcgtcatccgtgatgtgtatttcgccggcggcgcccgtacgccc
agcatccggctcgatatcaagccggttcagatggacgcctccatcgctcagtttgtcatc
gacatcgacggccaggccgtgcgctacgcccacggcccgcaagtgtcgacgccggttcaa
tggcccggcccggcagggcgcaaccaggtacgcgtgcaggttaccggcagcaacggcagc
agtggttcgctgatgaccgaaggcgcctgggcgctgcaccgcatgttcgaccgcgccagc
ctggcgccccagcgcgacgccgaaaaaatgctggcgacgttcgacgtcaacggcgccaaa
gccgtgttcgaagtgaccgccagcagtgcgcacaacccgttccgcctggcccagctggcc
agcttttcctgcccgggaggggtgtga

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