Massilia violaceinigra: CR152_19440
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Entry
CR152_19440 CDS
T05157
Name
(GenBank) pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mass
Massilia violaceinigra
Pathway
mass00040
Pentose and glucuronate interconversions
mass01100
Metabolic pathways
mass02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CR152_19440
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CR152_19440
Enzymes [BR:
mass01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CR152_19440
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ATQ76456
UniProt:
A0A2D2DNA0
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All DBs
Position
4413840..4415285
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AA seq
481 aa
AA seq
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MKTTLLAVSLMLASTAQAAPLDASTFVGASTPLQTALYGVRNYSAPVLVNGKHDPASYMA
APKLPAWQFARVDPTGGVLTFERQSAPATGWHTWSRKGKVVVTGGGAARSDRVYTVFNGQ
QLVAAIKEAGNEPKIIRVVGHIDLRWSQNNTVFKEYTSYADQKYGGSINLPSNTTLVGIN
DAQGRPARMTGTALLIGGELALAPGGDPEADFKKWIKDGKDGEDYPTWTRNIIVRNLVID
TPWDVNPEDAGNAYADGITVSRGQNIFLDHLSVSDGDTPESLATGTYKTRHDGALDVVRG
SDYVTIANSYFANHHKTTLVGNGDGGRAWSDEGRLHVTFSGNWWSSVAARLPLNRYGQVH
MSNNLITGNVMTKETDVKFESGTDARYRSNMLVENSYYNITGLKLSEFCGKAIKGKGFIG
FRSSGHIFTSDRAGTNAVDGQCGMARPDAANLWTPPYLYALQTASSTLLAVPAQAGAGKL
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaccttactcgccgtcagcctcatgctggcatccaccgcgcaggcggccccg
ctcgacgcgagcacttttgttggcgccagcacgcccctgcaaacggccctgtacggcgtg
cgcaactactcggcgcccgtcctggtgaacggcaagcacgaccccgccagctacatggcc
gcgcccaagctgccggcgtggcagttcgcccgggtcgacccgaccggcggcgtgctcacc
ttcgagcgccagagcgcgccggccaccggctggcatacctggtcgcgcaagggcaaggtg
gtggtcacggggggcggcgcggcccgctccgaccgcgtctacaccgtgttcaacggccag
caactggtggccgccatcaaggaagccggcaacgaaccgaagatcatccgcgtggtcggc
cacatcgacttgcgctggagccagaacaatacggtgttcaaggaatacaccagctacgcc
gatcagaaatacggcggctcgatcaacctgccgtcgaacaccaccctggtgggcatcaac
gacgcccagggccggccggcgcgcatgacgggcaccgcgctgctgatcggcggcgaactg
gcgctggcgccgggcggcgatccggaagccgatttcaagaagtggatcaaggacggcaag
gacggcgaggattatccgacctggacccgcaacatcatcgtgcgcaacctggtgatcgac
acgccgtgggatgtcaatcccgaggacgcgggcaatgcctacgccgacggcatcaccgtc
tcgcgcggacagaacattttcctcgatcacctgagcgtgagcgatggcgacacgcccgag
tcgctcgccaccggcacgtacaagacgcggcatgacggcgcgctcgacgtggtgcgcggc
agcgattacgtcaccatcgccaacagctatttcgccaatcaccacaagaccacgctggtc
ggcaatggcgacggcggccgcgcctggagcgacgagggccgcttgcatgtgacgttttcg
ggcaactggtggagttcggtagcggcgcgcctgccgctcaatcgctacggccaagtgcac
atgtccaacaatctcatcaccggcaacgtgatgaccaaggagaccgacgtcaagttcgaa
agcggcaccgatgcgcgctaccgctcgaacatgctggttgaaaacagctactacaacatc
accggcctcaagctgtccgagttctgcggcaaggccatcaagggcaagggcttcatcggc
ttccgctcgtccggccacatctttaccagcgaccgcgccggcaccaatgcggtcgacggc
cagtgcggcatggcgcgcccggacgcagccaacctgtggaccccgccgtatctgtacgca
ctgcagacggcgagctcgacccttctcgccgtacccgcgcaggccggtgccggcaagctc
aagtaa
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