Massilia violaceinigra: CR152_20385
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Entry
CR152_20385 CDS
T05157
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mass
Massilia violaceinigra
Pathway
mass03420
Nucleotide excision repair
mass03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CR152_20385
03430 Mismatch repair
CR152_20385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mass03400
]
CR152_20385
Enzymes [BR:
mass01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CR152_20385
DNA repair and recombination proteins [BR:
mass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CR152_20385
MMR (mismatch excision repair)
Other MMR factors
CR152_20385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
HHH_5
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATQ76610
UniProt:
A0A2D2DNR4
LinkDB
All DBs
Position
4667982..4670072
Genome browser
AA seq
696 aa
AA seq
DB search
MTAVPHAASSDDPFASLNPAQRAAVEHDIGVAAGSARPLLVIAGAGSGKTNTLAHRVARL
IMSGADPQRILLLTFSRRAANEMTQRASNVLHRIMGARGGQPPASLPWAGTVHSIGARLL
RDYAGRIGLEESFTIHDRGDSEDLMGMVRHDIGLTQTEKRFPLKGTCLAIYSRVVNSRDT
LALVLQSTFPWCSEWEAQLKTLFGAYVDAKQEQNVLDYDDLLLFWAEMAADPDLGAHIGG
LFDHVLVDEYQDTNRLQAAILMGMKPGGEGVMVVGDDAQSIYSFRGATVRNILDFPKQFA
QEACIVTLDRNYRSTQPILDASNAVIGAALERHAKTLWTDKVSTVRPQLVLIPDEAEQAR
WVCNRILEHRETGMALKAQAVLFRAASHSAALELELMRRNIPFVKFGGLKFLEASHIKDV
LAVLRFAQNPSGRVAGFRVVQLVPGIGAATATRLLDAVGEAAEPLRAVEQFAAPARSGGD
WEQFVALFRALRAPGLRWPADIELVKNWYLPHLERMYDDAQVRVADVEQLARLAGGHGSR
ETFLAEITLDPPEATSDRAGPPLLDEDYLILSTIHSSKGQEWKSVHVLNVVDGCIPSDMS
TGNAADIEEERRLLYVAMTRAKEHLHLVVPNRFFIKQQAQMGDRHVYAARTRFISPAMLK
HFEETVWMTADTQQSRTPMPDSVRMLVRERARNAWK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagttccccatgccgcttcctccgacgatccctttgccagcctcaatcccgcg
cagcgtgctgccgtcgagcatgacattggcgtggccgcgggcagcgcgcggcccctgctg
gtgatcgccggcgccggttccggcaagaccaatacgctggcgcaccgcgtggcgcgcctg
atcatgagcggcgccgatccccagcgcatcctgctgctcacgttttcgcgccgcgccgcc
aacgagatgacgcagcgcgccagcaacgtgctgcaccggatcatgggtgcgcgcggcggc
cagccaccggccagcctgccttgggcgggcaccgtccacagcatcggtgcgcgcctgctg
cgcgattacgccggccgcatcggcctcgaggaatcgttcaccatccacgaccggggcgat
tccgaagatttgatgggcatggtgcgccacgacatcggcctgacccagaccgaaaaacgc
tttcccctcaagggaacctgcctggccatctattcgcgcgtggtcaacagccgtgacacc
ttggcgctggtgctccagagtacctttccctggtgcagtgaatgggaagcccagctcaag
accctgttcggggcctatgtcgacgccaagcaggagcagaacgtgctcgattacgacgat
cttttactgttttgggccgagatggcggccgatcccgacctcggcgcccacatcggcggc
ctgttcgaccatgtccttgtcgatgagtaccaggacaccaaccgcctgcaggccgcgatc
ctgatgggcatgaagccgggcggcgagggtgtgatggtggtcggcgacgatgcgcagtcg
atctattctttccgcggcgccacggtgcgcaatattctcgatttcccgaaacagttcgcg
caggaagcctgcatcgtcaccctggaccgcaactaccgttcgacccagccgatcctggat
gcgtccaacgccgtgatcggcgccgcgctcgagcgccacgccaagaccttgtggaccgac
aaggtgtctaccgtccggccgcaactggtgctcattcccgacgaggccgagcaggcgcgc
tgggtctgcaaccgtatcctggagcaccgcgaaacgggcatggcgctcaaggcgcaggcg
gtgctgttccgcgcggccagccacagcgccgcgctggagttggaactgatgcgccgtaat
attcccttcgtcaaattcggcggcctgaagttcctggaagcatcccacatcaaggatgta
ctggcggtgctgcgctttgcccagaatccaagcggccgggtggccggtttccgcgtggtg
caactggtgccgggcatcggcgccgccaccgccacccggctgctggacgcggtcggcgag
gcggccgagccgctgcgcgcggtcgagcaatttgccgcgcccgccaggagcggcggcgac
tgggagcagtttgtcgcgctgtttcgcgccctgcgcgcgccagggctgcgctggccggcc
gatatcgagctggtcaagaactggtacctgccgcacctcgaacgcatgtatgacgacgcc
caggtgcgcgtggccgatgtggaacagctggcgcgcctggcgggcggtcatggctcgcgc
gaaacgtttctggctgagatcacgctcgacccgcccgaagcgaccagcgaccgcgccgga
ccgccccttctggacgaggattacctgattctctcgaccatccattcatccaagggacag
gaatggaaatcggtgcatgtattgaacgtggtggacggttgcatcccgtccgacatgagt
accggcaatgccgccgatatcgaggaggagcgccgcctgctgtacgtggccatgacacgc
gccaaggagcatcttcacctggtggtgccgaaccggtttttcatcaagcagcaggcgcag
atgggcgaccgccacgtgtacgcggcgcgcacgcgcttcatcagcccggccatgctcaag
catttcgaggaaacggtgtggatgacggccgacacccagcagagtcgcacaccgatgccc
gacagcgtgcgcatgctggtgcgcgagcgggcgcgcaatgcgtggaagtag
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