Massilia violaceinigra: CR152_22885
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Entry
CR152_22885 CDS
T05157
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mass
Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mass03032
]
CR152_22885
03400 DNA repair and recombination proteins [BR:
mass03400
]
CR152_22885
Enzymes [BR:
mass01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CR152_22885
DNA replication proteins [BR:
mass03032
]
Prokaryotic type
DNA Topoisomerases
CR152_22885
DNA repair and recombination proteins [BR:
mass03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CR152_22885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
ATQ77043
UniProt:
A0A2D2DQ18
LinkDB
All DBs
Position
complement(5325929..5327041)
Genome browser
AA seq
370 aa
AA seq
DB search
MKRDEPSAASPAPPADVLAAAKSAGLRYVSDSSPGIARKAHGKNFIYLDASGETVTDEDT
LARIRALAIPPAWTDVWICKLANGHLQATGRDAKQRKQYRYHAKWRNLRDEVKYERMISF
GKALPAIRRTVDADLKRPGLPREKVLATIVYLLEATMMRIGNEEYARQNKSFGLTTLRDR
HVRIDGKAVEFRFRGKSGVFHNVKVEDRRLARIISRIRDLPGQELFHYEDDDGNAHTVDS
SDVNDYLREITGEEYTAKDFRTWSGTVLAALALQEFEKFDSEAQAKKNIVRAIESVAEKL
GNTPSICRKCYVHPAILDAYLDGTVLEAMRESTRRELVEDLHELQPEEAAVVAFLQQRLQ
VPPVKRKAAR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagacgaacccagcgccgcgagcccggcgcctcccgccgatgtgcttgccgcc
gccaaatccgccggattgcgctacgtcagcgacagctcacccggcatcgcgcgcaaggcg
cacggcaagaattttatctacctcgacgccagcggcgagaccgtcaccgacgaggacacc
ctggcacgcatccgcgcgctcgccattccgccggcctggaccgatgtgtggatctgcaag
ctggccaacggccacctgcaggccaccgggcgcgacgccaaacagcgcaagcaataccgc
taccacgccaaatggcgcaacctgcgcgatgaagtcaaatacgaacgcatgatcagcttc
ggcaaggccctgcccgccatccgccgcactgtcgacgccgacctcaagcgccccggcctg
ccgcgcgaaaaggtgcttgccacgatcgtgtatctgctcgaagcgaccatgatgcggatc
ggtaacgaagaatatgcgcgccaaaacaagtccttcggcctgaccaccctgcgcgaccgc
catgtgcggatcgacggcaaggcggtcgagttccgcttccgcggcaagagcggcgtgttc
cacaacgtgaaggtcgaagaccggcgcctggcgcgcatcatcagccgcatccgcgacttg
ccgggacaggaactgtttcattacgaggatgacgacggcaacgcgcacacggtcgactcg
tccgatgtgaacgactacctgcgtgaaattaccggcgaagagtacaccgcaaaggatttc
cgtacctggtcgggcacggtgctggcggcgttggcgttgcaggagttcgagaagttcgac
tccgaagcgcaagccaagaaaaacatcgtgcgcgcgatcgaatcggtggccgaaaagctg
ggcaacaccccgtcgatctgccgcaagtgctatgtgcacccggccattctcgacgcttac
ctcgacggcaccgtgctcgaagcgatgcgcgagagcacgcggcgcgagctggtggaggat
ttgcacgagttgcagccggaagaagcggccgtggtggcgtttctgcagcagcgcttgcag
gttccgccggtcaagcgcaaggccgctcgctag
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