Massilia violaceinigra: CR152_24205
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Entry
CR152_24205 CDS
T05157
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mass
Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mass03032
]
CR152_24205
03036 Chromosome and associated proteins [BR:
mass03036
]
CR152_24205
03400 DNA repair and recombination proteins [BR:
mass03400
]
CR152_24205
DNA replication proteins [BR:
mass03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CR152_24205
Chromosome and associated proteins [BR:
mass03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CR152_24205
DNA repair and recombination proteins [BR:
mass03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CR152_24205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
MarR
Motif
Other DBs
NCBI-ProteinID:
ATQ77272
UniProt:
A0A2D2DQL3
LinkDB
All DBs
Position
complement(5619285..5619557)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIEEIAKSADITKASATRALDAMIDAVTASLQKNDSVTLVGFGTFSVGERAARTG
RNPRTKEAIKIAAAKVPKFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaacagaattgatcgaagaaatcgcgaagtcggcggacatcaccaaggcctcg
gccacgcgcgcgctcgacgcgatgatcgatgccgtcaccgccagcctgcagaagaacgac
agcgtgaccctggtcggcttcggcaccttctcggtgggcgagcgcgccgcgcgtaccgga
cgcaatccacgcaccaaggaagcgatcaagatcgcggcggcgaaagttcctaaatttaaa
gctggtaaagcgcttaaagatgcagtaaactaa
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