Massilia violaceinigra: CR152_27380
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Entry
CR152_27380 CDS
T05157
Name
(GenBank) pectin methylesterase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mass
Massilia violaceinigra
Pathway
mass00040
Pentose and glucuronate interconversions
mass01100
Metabolic pathways
mass02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CR152_27380
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CR152_27380
Enzymes [BR:
mass01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CR152_27380
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectinesterase
Big_5
Pectate_lyase_5
3keto-disac_hyd
Motif
Other DBs
NCBI-ProteinID:
ATQ77807
UniProt:
A0A2D2DS67
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All DBs
Position
6401014..6404556
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AA seq
1180 aa
AA seq
DB search
MNEAPIRAAALSAALLMAAACSQAQAAVDPARQSAPADGWASQSGGTVGGASAVPEQIYT
VADRAQLLAALRNGGNTSKIIKLTGMIDMSGGVPYVSTGDQAARGAIRLGSNTTLIGAGA
NAGIVNGHIAVQNVEQVIIRNLKIMNPCDAGPIWDPLDGASGNWNSAYDAIGISNSHHVW
IDHNSFTDAPLTDDLQPIENGKRKQCHDGAVDITNASDFVTLSYNHFGQHNKNNLIGSSD
TATTDEGKLRITFSNNVFADVTQRSPRVRFGMVHLFNNYYAGSKSAPVYPHMYSVGVGQS
AKILSNNNVFAITGASSCADVVSSPSGTGGTFSDKGSVLNGVALPTCAVAPAAWSAPYAF
TPRPVALVKANALAQAGGGKLSTSITGTGDTSTDTVPTQFCPASGLYFCDDFQDGSTARW
NLLPLAGPNGAFTVQLDASGTTNKVLQYTAASTGGILALVKPDAFKGVLSGDYFVEARIR
PLTNSTTGNKQLYLITRYVDPANWYGAGLNVQNATTSTQVEIARMLGNSLSKIKQSKRAI
AMDAQFYTVRFELIGSTLTLYLDGENLGSVSDASFAARGLIGLYTTNKSFQIDDVRVGDP
KMKPVQLTLNPHPLTYTAEAGDAPLLVNVGAKKGDGSMDTFTVESSKPGVVGVSVDGARV
TLSPLAAGSAKIVFTSGADPTLSRSIGATIAPAFVQPTQTYRLDGASFPAVGALDEAVDS
PLSLTFDSPPTLGTGGTIRIFRKSDDALVDVIRLADEVDTIGHAGQDRLRRVRYLPVRID
GSTVTIKPHNNRLAYGTGYYVAIADGVFTSATLGGTPFRGIGKAGGWSFTTKTAAPTSAS
LSVDDDGPADFRTVQGAINHASGAFAKADPVTISVRNGSYEELLYLRGKDNLTIKGESRD
GVVIHYTNYDSLNPGTGASEAPGSNGAPLGGRSVLLVETADMVTLDTLTLKNTTLRSPAI
SSQAEALYFNSDARLVATNAAFFSEQDTLNLKGYAWFHRSLVAGNVDFIWGSARAALFEE
SEIRSVGDSTSATGGGYVLQARVPNAADKGFVFLNSSLTHGPGPGPLHGDIPNGATWLAR
SPGGTATWDNIAFINCKMDAHVAPAGWAGLGVNGQPAPNPVQPNAVSGWREHGTIDLQGT
PLNLAARVGGYLLSDEEVAAGFATRAKVFSAWNSGLGWNP
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagcaccgatcagggccgctgctctcagcgccgccctgctgatggcggccgcc
tgtagccaggcccaggcagccgtcgatcccgcgcgccagagcgctcccgccgacggctgg
gccagccaatccggcggcaccgtgggcggcgccagcgccgttcccgaacagatttacacc
gtggccgaccgcgcccagctgctggccgccctgcgtaacggcggcaacaccagcaagatc
atcaagctgaccggcatgatcgacatgagcggcggcgtaccttacgtcagcaccggcgac
caggccgcgcgcggcgccatccgcctcggcagcaacacgacgctgatcggcgccggggcc
aatgccggcatcgtcaacggccatatcgcggtacaaaacgtcgagcaggtgatcatccgc
aacctcaagatcatgaacccctgcgacgccggccccatctgggacccgctcgacggcgcc
agcggcaactggaattcggcttacgacgcgatcggcatctccaactcgcaccacgtctgg
atcgaccacaacagctttaccgacgccccgctgaccgacgacttgcagcccatcgaaaac
ggcaagcgcaagcagtgccatgacggcgcggtcgacatcaccaacgcctccgacttcgtc
acgctgtcgtacaaccatttcggccagcacaacaagaacaacctgatcgggtcgagcgac
acggccaccaccgacgaaggcaagctgcgcatcacgttcagcaacaatgtgttcgccgat
gtcacccagcgctcgccgcgggtgcgctttggaatggtccatctgttcaataactactac
gcgggcagcaagtcggcgcccgtctatccccatatgtatagcgtgggcgtgggccagagc
gccaagatcctgtcgaataataatgtcttcgccatcacgggcgccagcagctgcgccgat
gtcgtctcctcgccgagcggcacgggcggcaccttcagcgacaagggctcggtgctgaac
ggcgtggcgctgccgacgtgcgcggtcgcaccggccgcctggagcgcgccgtacgcgttc
acgccgcgcccggtggcgctggtcaaggccaacgccctggcgcaagccggcggcggcaag
ctgagcaccagcatcacgggcaccggcgacaccagcaccgataccgtgccgacccagttc
tgccccgccagcggcctgtatttttgcgacgacttccaggatggatcgaccgcgcgctgg
aacctgctgccgctggccggccccaacggcgcttttaccgtgcagctggatgcctccggc
accaccaacaaggtgctgcagtacacggccgccagcaccggcggcattctggcgctggtc
aagccggacgcgttcaagggcgtgctctcgggcgactatttcgtcgaagcacgcatccgc
ccgctgaccaacagcaccaccggcaacaagcagctgtacctgatcacgcgctacgtcgac
ccggccaactggtacggtgccggcctgaacgtgcagaacgcgaccaccagcacgcaggtc
gagatcgcccgcatgctgggcaacagcttgagcaagatcaagcagtccaagcgcgccatc
gccatggatgcgcagttctacaccgtacgtttcgagttgatcggcagcaccctgaccctg
tatctcgatggcgagaacctcggctcggtgagcgacgccagctttgccgcgcgcggcctg
atcggcctgtacacgaccaacaaatcgttccagatcgacgatgtgcgggtgggcgatcca
aagatgaaaccggtgcagctgaccctgaacccgcatccgctgacttacacggccgaagcg
ggcgacgcgccgctgcttgtcaacgtgggcgccaaaaaaggcgacggcagcatggatacc
ttcacggtcgagtcaagcaaaccgggcgtggtgggcgtgagtgttgacggcgccagggtc
acattgagcccgctggccgccggcagcgccaagatcgtgtttaccagcggcgccgatccg
accctgtcgcgcagcatcggcgccaccattgcgccggccttcgtgcagccgacccagacc
taccggctggacggcgccagctttcccgccgtgggcgcgcttgatgaagccgtcgacagt
ccgctcagcctgactttcgacagcccgcccaccctgggcaccggcggcaccatccgcatc
ttccgcaagagcgacgatgcgctggtcgacgtgatccgcctggccgacgaagtcgacacc
atcggccatgccgggcaagaccgcctgcgccgcgtgcgctacctgccggtgcgcatcgac
ggcagcacggtgaccatcaagccgcacaacaaccgcctcgcttacggcacgggctactac
gtggccattgccgacggcgtattcacaagcgcgaccctgggcggcacgccgtttcgcggc
atcggcaaggcgggcggctggagcttcacgaccaagaccgctgcgcccaccagcgccagc
ctgagcgtggacgacgatggcccggccgatttccgcaccgtgcagggcgccatcaaccac
gcgagcggcgccttcgccaaggccgatccggtgacgatcagcgtgcgcaacggcagctac
gaagaattgctctacctgcgcggcaaggacaatctgacgatcaagggcgaaagccgcgac
ggcgtggtgatccactacaccaactacgattcgctcaaccccggcaccggcgccagcgaa
gcgccgggtagcaatggtgcgccgctgggcgggcgttccgtgctgctggtggaaacggcc
gacatggtcacgctcgacacgctgaccctgaaaaacaccaccctgcgctcgccggccatc
tcgtcccaggccgaagcgctctacttcaacagcgacgcccgcctggtggccaccaacgcc
gccttcttcagcgaacaggacaccctgaacctcaagggctatgcctggttccaccgttcg
ctggtggccggcaacgtcgactttatctggggcagcgcgcgcgccgccctgttcgaggaa
agcgaaatccgcagcgtgggcgacagcaccagcgcgaccggcggcggctacgtgctgcag
gcgcgcgtgccgaacgcggccgacaagggcttcgtttttctcaacagcagcctgacccac
ggccccggacccggccccttgcacggcgacattcccaacggcgccacctggctcgcgcgc
agtcccggcggcacggccacctgggacaatatcgccttcatcaactgcaagatggatgcg
cacgtcgccccggccggctgggcgggcctgggcgtgaacggccagccggcgcccaacccg
gtccagccgaacgcggtgtcgggctggcgcgagcacggcacaatcgacctgcagggcacg
cccttgaacctggcggcccgggtaggcggctacctgctgagcgacgaggaagtggcggcc
gggtttgccacccgtgccaaggtgttttccgcatggaatagcggactcggctggaatcca
tag
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integrated database retrieval system
