Massilia violaceinigra: CR152_28115
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Entry
CR152_28115 CDS
T05157
Name
(GenBank) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
mass
Massilia violaceinigra
Pathway
mass00040
Pentose and glucuronate interconversions
mass01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CR152_28115
Enzymes [BR:
mass01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CR152_28115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-ProteinID:
ATQ77939
UniProt:
A0A2D2DSI2
LinkDB
All DBs
Position
complement(6542453..6543265)
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AA seq
270 aa
AA seq
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MKRFNALLFAVVGLFVATSALAAPGKRAIPSCTKVLVTQTTDVPANTVFDGLVKYGKMVC
LVGNIKKMDGSQSESQIPHFTLGAGATLKNVVLGDPAKGTGRNLTAGGADGVHCAGNCKI
ENVYWGDVGEDAATLKGAGTMTVTGGAAYKAADKMFQNNGVNSKIVITNFYAEEGGKLYR
SCGNCSKQSARTVTINGVTIYNVNAGVGVNSSFDKSKLPALAKAYDVATMSDFVSNKASS
RCTAFVGTAKGNEPGKEKEADNIARACVFK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattcaacgcccttcttttcgcagtcgtcggactgtttgtcgccaccagcgca
ttggccgcccccggcaagcgcgccatcccgtcgtgcaccaaagtgctggtcacgcaaacg
accgacgtaccggccaacaccgtgttcgatggcctggtcaaatacggcaagatggtatgc
ctggtgggtaatatcaagaagatggatggcagccagtcggaaagccagatccctcacttc
accctcggcgctggcgccaccctcaagaacgtggtgctgggcgatcctgccaagggcacg
ggccgcaacctgaccgccggcggcgccgatggcgtccattgcgcgggcaactgcaagatc
gagaacgtgtactggggcgatgtgggcgaagatgcggctactctcaaaggcgccggcacc
atgaccgtcaccggcggtgcggcgtacaaagcagccgacaagatgttccagaataacggc
gtcaacagcaaaatcgtcatcaccaacttttacgcggaagaaggcggcaagctgtatcgc
tcgtgcggcaactgctcgaagcaatcggcacgcacggtcaccatcaatggcgtgacgatt
tataacgtcaatgcgggcgtgggcgtgaacagcagcttcgacaaatcgaaactgccggcg
ctggccaaggcctacgatgtggcgaccatgagcgacttcgtgtcgaacaaagcgtcgtcg
cgctgcacggccttcgtcggcaccgccaaaggcaatgagccgggcaaggaaaaggaagct
gacaacatcgcgcgtgcctgcgtattcaagtaa
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