Massilia violaceinigra: CR152_28230
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Entry
CR152_28230 CDS
T05157
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mass
Massilia violaceinigra
Pathway
mass03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CR152_28230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mass03400
]
CR152_28230
Enzymes [BR:
mass01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CR152_28230
DNA repair and recombination proteins [BR:
mass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CR152_28230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATQ77960
UniProt:
A0A2D2DSK1
LinkDB
All DBs
Position
complement(6564306..6565208)
Genome browser
AA seq
300 aa
AA seq
DB search
MSTSARDNAFLQEMGIGPLWTLRDAMPDEALSDELAAPAQEAAYEAAPVPAAVSANVPTA
VPTAVTMPAPPAVVARAVPPAATPAASPATDSAWGEEPPGPPPTEEEIAAMDWAQLKNAI
ANCTRCGLCKGGRKPVYGNGAKQASWFVAAGASTASDEKERQPVSGEPGKLLANMLAAVE
LSRDSNVYVTNLIKCRPTSANGGDRAPSAEEALACRPYLDRELALSGAPLVLTLGQIAAN
ALQGKPLQETLAGSRGQVHEVGGVKLVATLHPGELLRRGADKALAWADLCLARAHDGRPG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccagcgcgcgcgataacgcgtttttgcaggaaatgggcatcggcccgctgtgg
accttgcgcgatgccatgccggacgaggcactgtccgacgagctggcggcacccgcgcag
gaagccgcttacgaggctgctcccgtgcctgccgcggtgtccgccaacgtgcctaccgcg
gtgcctaccgccgtgaccatgcccgcgccgcctgcggtggtggccagggccgtgccgccc
gccgccacgccggcagcgagtccggccaccgattcggcctggggcgaggagccgcccggc
ccgccgccgaccgaggaagagatcgccgccatggactgggcccagctcaagaacgccatc
gccaactgcacccgctgcggcctgtgcaaaggcgggcgcaagccggtctacggcaacggc
gcgaagcaggcgagctggttcgtggccgccggcgcctcgaccgcctccgacgaaaaagaa
cgccagccggtctcgggcgagccgggcaagctgctggccaacatgctggccgccgtcgag
ctctcgcgcgacagcaatgtgtatgtaaccaacctgatcaaatgccggcccaccagcgcc
aacggcggcgaccgcgccccgagcgccgaggaagcgctcgcctgccgtccctacctggac
cgcgaactggcgctgtccggcgccccgctggtcctcacgctcggccagatcgccgccaac
gccttgcagggtaaaccgctgcaggaaacgctggccggctcgcgcggacaggtgcacgag
gtgggcggcgtcaagctggtggccaccctgcatccgggcgagctgctgcggcgcggcgcc
gacaaggcgctggcctgggccgatctgtgtctcgcgcgcgcgcacgatggccggcccggc
tga
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