KEGG   Massilia violaceinigra: CR152_28615
Entry
CR152_28615       CDS       T05157                                 
Name
(GenBank) VapC toxin family PIN domain ribonuclease
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
mass  Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:mass00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mass03016]
    CR152_28615
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mass02048]
    CR152_28615
Transfer RNA biogenesis [BR:mass03016]
 Prokaryotic type
  tRNA degradation factors
   CR152_28615
Prokaryotic defense system [BR:mass02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    CR152_28615
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: ATQ78028
UniProt: A0A2D2DSS4
LinkDB
Position
complement(6655623..6656024)
AA seq 133 aa
MPLYMLDTNICIYLMREQPEQVARRFAQCYVGDVVMSAITFAELEYGVTISANILRERQN
LAALVKDINVVPFDASAAVAYGPIREATRDRKKDQLDKLIAAHAVALDVTLVTNNERDFV
AYPGLRLENWVNG
NT seq 402 nt   +upstreamnt  +downstreamnt
atgccgttgtacatgctcgacaccaatatctgcatctatttgatgagggagcaacctgag
caagtggccaggcgctttgcccaatgctacgtgggcgatgtggtcatgtcggcgattacc
ttcgccgaactggaatatggcgtgaccatctccgcgaatatcttgcgtgaacggcagaac
ctcgctgcactcgtaaaagatatcaacgtcgttccattcgatgcttctgcagcggtggcg
tatggcccgatcagggaagcgacgcgcgaccgcaaaaaggatcagctcgacaagctcatc
gcagcgcatgccgtggcgcttgacgtgactcttgtcacaaataacgaacgcgactttgtc
gcctaccctgggctcagactggaaaactgggtcaacggctga

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