Massilia violaceinigra: CR152_29455
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Entry
CR152_29455 CDS
T05157
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mass
Massilia violaceinigra
Pathway
mass00521
Streptomycin biosynthesis
mass00523
Polyketide sugar unit biosynthesis
mass00525
Acarbose and validamycin biosynthesis
mass00541
Biosynthesis of various nucleotide sugars
mass01055
Biosynthesis of vancomycin group antibiotics
mass01100
Metabolic pathways
mass01110
Biosynthesis of secondary metabolites
mass01250
Biosynthesis of nucleotide sugars
Module
mass_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CR152_29455 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CR152_29455 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CR152_29455 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CR152_29455 (rfbB)
00525 Acarbose and validamycin biosynthesis
CR152_29455 (rfbB)
Enzymes [BR:
mass01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CR152_29455 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ATQ79178
UniProt:
A0A2D2DW28
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All DBs
Position
6852593..6853648
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AA seq
351 aa
AA seq
DB search
MILVTGGAGFIGSNFILDWLAHSDEGIVNLDQLTYAGNLNNLAALRGDARHLFVRGDMGE
QSLVAALLARHRPRALVHFAAESHVDRSIAAPGQFIATNIGGTFALLEAARAWWQCLPEP
ERADFRFLHVSTDEVYGSLGADQPAFTERSAYAPNSPYAASKAASDHLVRASFHTYGLPT
LTSNCSNNYGPYQFPEKLIPLMIATALAGHALPVYGDGMQVRDWLYVGDHCAALRCILAA
GHPGEVYNVGGENDMTNIDVVRTLCDLLDAAAPARASYRRQITHVADRAGHDRRYAVDAG
KLRRELGWTPAEHFASGIARTVHWYLAQRAWADEIASGAYRDARWPSGGAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgattctagtgaccggtggtgccggatttatcggatcgaatttcattctcgactggctg
gcgcacagcgacgagggcatcgtcaatctcgaccagctcacgtatgcgggcaatctgaac
aacctggccgcgctcaggggcgatgcgcgccacctgttcgtgcgcggcgatatgggcgag
cagtccctggtggcggccttgctggcccggcaccgcccgcgcgcgctggtccattttgcc
gccgaaagccatgtcgaccgctcgatcgcggcgccgggccagttcatcgccaccaatatc
ggcggcaccttcgcgctgctggaagcggcgcgcgcctggtggcagtgcctgccggagccg
gagcgcgccgatttccgcttcctgcatgtgtccaccgatgaagtgtatggctcgctcggc
gcggaccaaccggcattcaccgagcgttcggcgtatgcgccgaacagcccgtatgccgcc
tccaaggccgcgtccgaccatctggtgcgggccagctttcacacctatggcttgccgacc
ctgaccagcaattgctcgaataattacggcccctaccaattccccgaaaagctcatcccg
ctgatgatcgccacggccctggccgggcacgcgctgccggtgtacggcgacggcatgcag
gtgcgcgactggctgtacgtgggcgaccattgcgcggcgctgcggtgcatactggcggca
ggccatcctggagaggtgtataacgtgggaggagaaaacgacatgaccaatatcgacgtg
gtgcgcaccctgtgcgacttgctcgacgcggcggcgccggcacgcgccagttatcgccgg
cagatcacccatgtggccgaccgcgccggccacgaccgccgctacgcggtcgacgccggc
aagctgcggcgcgaactgggctggacgccggccgagcatttcgccagcggcatcgcgcgc
accgtgcactggtatctggcgcagcgcgcctgggccgacgagatcgcctcgggcgcctac
cgcgacgcccgctggcccagcggcggtgccgcatga
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