KEGG   Massilia violaceinigra: CR152_29455
Entry
CR152_29455       CDS       T05157                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
mass  Massilia violaceinigra
Pathway
mass00521  Streptomycin biosynthesis
mass00523  Polyketide sugar unit biosynthesis
mass00525  Acarbose and validamycin biosynthesis
mass00541  Biosynthesis of various nucleotide sugars
mass01055  Biosynthesis of vancomycin group antibiotics
mass01100  Metabolic pathways
mass01110  Biosynthesis of secondary metabolites
mass01250  Biosynthesis of nucleotide sugars
Module
mass_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:mass00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    CR152_29455 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CR152_29455 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CR152_29455 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CR152_29455 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CR152_29455 (rfbB)
Enzymes [BR:mass01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CR152_29455 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4
Other DBs
NCBI-ProteinID: ATQ79178
UniProt: A0A2D2DW28
LinkDB
Position
6852593..6853648
AA seq 351 aa
MILVTGGAGFIGSNFILDWLAHSDEGIVNLDQLTYAGNLNNLAALRGDARHLFVRGDMGE
QSLVAALLARHRPRALVHFAAESHVDRSIAAPGQFIATNIGGTFALLEAARAWWQCLPEP
ERADFRFLHVSTDEVYGSLGADQPAFTERSAYAPNSPYAASKAASDHLVRASFHTYGLPT
LTSNCSNNYGPYQFPEKLIPLMIATALAGHALPVYGDGMQVRDWLYVGDHCAALRCILAA
GHPGEVYNVGGENDMTNIDVVRTLCDLLDAAAPARASYRRQITHVADRAGHDRRYAVDAG
KLRRELGWTPAEHFASGIARTVHWYLAQRAWADEIASGAYRDARWPSGGAA
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgattctagtgaccggtggtgccggatttatcggatcgaatttcattctcgactggctg
gcgcacagcgacgagggcatcgtcaatctcgaccagctcacgtatgcgggcaatctgaac
aacctggccgcgctcaggggcgatgcgcgccacctgttcgtgcgcggcgatatgggcgag
cagtccctggtggcggccttgctggcccggcaccgcccgcgcgcgctggtccattttgcc
gccgaaagccatgtcgaccgctcgatcgcggcgccgggccagttcatcgccaccaatatc
ggcggcaccttcgcgctgctggaagcggcgcgcgcctggtggcagtgcctgccggagccg
gagcgcgccgatttccgcttcctgcatgtgtccaccgatgaagtgtatggctcgctcggc
gcggaccaaccggcattcaccgagcgttcggcgtatgcgccgaacagcccgtatgccgcc
tccaaggccgcgtccgaccatctggtgcgggccagctttcacacctatggcttgccgacc
ctgaccagcaattgctcgaataattacggcccctaccaattccccgaaaagctcatcccg
ctgatgatcgccacggccctggccgggcacgcgctgccggtgtacggcgacggcatgcag
gtgcgcgactggctgtacgtgggcgaccattgcgcggcgctgcggtgcatactggcggca
ggccatcctggagaggtgtataacgtgggaggagaaaacgacatgaccaatatcgacgtg
gtgcgcaccctgtgcgacttgctcgacgcggcggcgccggcacgcgccagttatcgccgg
cagatcacccatgtggccgaccgcgccggccacgaccgccgctacgcggtcgacgccggc
aagctgcggcgcgaactgggctggacgccggccgagcatttcgccagcggcatcgcgcgc
accgtgcactggtatctggcgcagcgcgcctgggccgacgagatcgcctcgggcgcctac
cgcgacgcccgctggcccagcggcggtgccgcatga

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