Massilia violaceinigra: CR152_31110
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Entry
CR152_31110 CDS
T05157
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
mass
Massilia violaceinigra
Brite
KEGG Orthology (KO) [BR:
mass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mass03000
]
CR152_31110
Transcription factors [BR:
mass03000
]
Prokaryotic type
Helix-turn-helix
Other families
CR152_31110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA
AAA_5
AAA_2
Mg_chelatase
Xre-like-HTH
HTH_28
HTH_23
TIP49
AAA_19
HTH_17
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ATQ78471
UniProt:
A0A2D2DU18
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Position
7234532..7236160
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AA seq
542 aa
AA seq
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MSYSSRTAGEAHDKPVIWTVSVSRLSDLFRDITLEYDHLAAIEPVNLGFDDAARHIRERM
ANERCDVVIAAGSNAAYLKGRVSVPVVIAKASGFDMMQALARARRVSARIGVITYQQQLP
ELAEFAGTFGFSIAQRTYVTEEDARAQINDLKAAGIEAIVGAGLITDLAEEAGLTGVFVY
SAASIRQAFDDALELARLTQLESNSGRRPVVADTLRTRHGLNDLRGESQAMETVRQAVVL
YARSPATVLIQGETGTGKELVAQAIHRESPRSLGANRPFVAINCGAVAESLLESELFGHE
EGAFTGARRGGHAGLFEAANRGTLFLDEIGEMPLPLQTRLLRVLEEREVVRVGGTRPVAI
NVRVVCATHCDLEQRVREGRFRADLFFRLAVLRLSLPPLRERSADVVALAEWSLKNALAA
LGARPHPNLHAEMAGCAPLLERYGWPGNVRELRNLMERVALFLAAEPLQALTPAFVLSVA
PELGRDIQAALAVQVPAAETVEQVLARFGGRRDEAAAHLGISRTTLWRKLKLGSRLRGND
GI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcctattcttcccgcactgctggcgaggcccacgacaagccggtcatctggaccgtt
tccgtgtcgcgcctgtccgacctttttcgcgacatcacgctcgaatacgaccacctggcg
gcgatcgagcccgtcaaccttggcttcgacgacgccgcccgccatatccgcgagcgcatg
gccaacgaacgctgcgacgtggtgatcgcggccggctcgaacgcggcttacctgaaaggc
cgcgtgtcggtgccggtggtgatcgccaaggccagcggtttcgacatgatgcaggcgctg
gcgcgcgcgcgccgcgtatcggcgcgtatcggcgtcatcacctaccagcagcagctgccc
gaactggccgaattcgccggcacgttcggcttttccatcgcgcagcgcacctacgtcacc
gaagaagacgcgcgcgcccagatcaacgacctgaaagcggccgggatcgaggcgatcgtc
ggcgcgggcctgatcaccgacctggccgaggaagcgggactgaccggcgtattcgtgtat
tcggccgcgtcgatccgccaggccttcgacgatgcgctcgaactggcgcgcctgacccag
ctcgaatcgaacagcggccggcgtccggtggtcgccgacaccttgcgtacccggcatggc
ctgaacgatttgcgtggcgaatcgcaagcgatggagaccgtacgccaggcggtggtcctg
tatgcgcgctcgcccgccacggtgctgatccagggcgaaaccggcaccggcaaggagctg
gtggcgcaggcgattcaccgcgaaagcccgcgcagcctgggtgcaaaccggccgttcgtg
gccatcaactgcggcgcggtggccgagtcgctgctggaatcggaactgttcggacacgag
gaaggtgcgttcaccggcgcgcgccgcggcggccacgcgggcttgttcgaagcagccaac
cgcggcacgctgttcctcgacgagatcggcgaaatgccgctgccgctgcaaacgcgcctg
ctgcgtgtgctcgaagagcgcgaggtggtgcgggtcggcggcacgcgcccggttgcgatc
aatgtacgggttgtctgcgccacccactgcgacctggaacagcgggtgcgcgagggacgc
tttcgggccgatctgtttttccggctggcggtactgcggctgtcgttaccgccgctgcgc
gaacgcagtgcagacgtggtggcgctggccgagtggtcgctcaagaatgcgctggcggcg
ctgggcgcgcggccgcatcccaatctgcatgcggagatggcgggctgcgcgccgctgctg
gagcgctacggctggccgggaaatgtgcgcgaactgcgcaacctgatggaacgggtggcg
ctgtttctggcggccgagcctttgcaggcattgacgccggcgtttgtgctgtcggttgcg
ccggaattgggccgggacattcaggcggcgctggccgtgcaggtgccggcggccgaaacg
gtggagcaggttttagcgcgtttcggcggccggcgcgacgaggcggccgcgcatctgggc
atcagccggaccacgttgtggcgcaagcttaaattgggttcccgcctgcgcgggaacgac
ggaatatag
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