KEGG   Massilia sp. WG5: AM586_00340
Entry
AM586_00340       CDS       T04122                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
masw  Massilia sp. WG5
Brite
KEGG Orthology (KO) [BR:masw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:masw03400]
    AM586_00340
Enzymes [BR:masw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AM586_00340
DNA repair and recombination proteins [BR:masw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AM586_00340
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 DUF5052
Other DBs
NCBI-ProteinID: ALK94963
LinkDB
Position
complement(3249978..3252035)
AA seq 685 aa
MSTPNFGLNGPQSEAVLYLDGPCLVLAGAGSGKTRVITQKIAYMIEHRGYDPRTIAALTF
TNKAALEMQERIGKLLKQPKQAKQLTVSTFHSLGVKILRQEAAGVGLKDKFSIMDSDDCY
TVVSDLAVTTDKQEIRRIQNAISLWKNGLVDPEDAIRDAKDEDEAHAGRIYRSYVATLQA
YQAVDFDDLIRLPVELFRNNEPIRDRWQRRLRYLLMDEYQDTNTCQYELVKLLVTGLGKK
PMFTAVGDDDQAIYAWRGASVENLKTLQTDFPDLRVIKLEQNYRSTTRILQAANAVIGNN
PKLFEKALWSEHGLGEPIKVLGMPNEETEADQVAMMISSERFQRKNKWADFAILYRGNHQ
ARIIEQALRKERIPYTISGGQSFFDKAEIKDVIAYLRLIANQDDDPAFIRAITTPKRGVG
MTTIEVLGEVSKQWNCSLFEAAFKGGIEARLQDRQLIPLREFCHWINELEDRATRPGPSG
SGDNAAELLDDMMKEINYEHYLYENFDDKAAQARWQNVLEFTNWLKERGRGGRERDGEEK
NLLELTQMVALMSMLEGQDEEQDAVRMSTLHASKGLEYPHVYLVGVEEGILPHKGDPDDP
VERIAARIQEERRLMYVGITRAQRTLHVLWCKKRKRAGELLHCDPSRFIKEMALEVGEAP
PKEDEVLSPKARLANLKALLATPKV
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgtcgaccccgaatttcggcctcaacggtccgcagagcgaagccgtgctctacctggac
ggcccctgcctggtgctggctggcgccggctccggcaagacccgcgtgatcacccagaag
atcgcctacatgatcgagcaccgcggctatgatccgcgcaccatcgccgcgctgaccttc
acgaataaagccgcgctggagatgcaggagcggatcggcaagctgctgaaacagcccaag
caggccaagcagctgaccgtgtcgaccttccactcgctgggcgtcaagatcctgcgccag
gaagcggccggcgtcggcctgaaggacaagttctcgatcatggacagcgacgactgctac
accgtcgtgtccgacctggcggtgaccaccgacaagcaggaaatccgccgcatccagaac
gcgatctcgctgtggaagaacggcctggtcgacccggaggacgcaatccgtgatgccaag
gacgaggacgaagcccacgccggccgcatctaccgcagctatgtggcgaccctgcaggcc
taccaggcggtcgacttcgacgacctgatccgcctgccggtcgagctgttccgcaacaac
gagccgattcgcgaccgctggcagcgccgcctgcgctacctcttgatggacgagtaccag
gacaccaacacctgccagtacgaactggtgaaactgctggtgacgggcctcggcaagaag
ccgatgttcacggccgtgggcgacgacgaccaggcgatctatgcctggcgcggcgcttcg
gtcgagaacctgaaaaccctgcagaccgacttcccggacctgcgggtcatcaagctggag
cagaactaccgctcgaccacccgcatcctgcaggcggcgaatgccgtcatcggcaacaac
ccgaagctgttcgagaaggcgctgtggtccgagcatggcctgggcgagccgatcaaggtg
ctgggcatgccgaacgaagagacggaagccgaccaggtggcgatgatgatctcgtccgag
cgcttccagcgcaagaacaaatgggcggacttcgccatcctgtaccgcggcaaccaccag
gcccgcatcatcgagcaggcgctgcgcaaggagcgcatcccctacacgatctcgggcggc
cagagcttcttcgacaaggccgagatcaaggacgtcatcgcctacctgcgcctgatcgcc
aaccaggacgacgacccggccttcatccgcgccatcacgaccccgaagcgcggggtcggc
atgaccaccatcgaggtgctgggcgaagtctcgaagcagtggaactgctcgttgttcgag
gccgccttcaagggcggcatcgaagccaggctgcaggaccgccagctgatcccgctgcgc
gagttctgccactggatcaacgaactggaagaccgcgccacccgtcccggcccgtccggc
agcggcgacaatgccgccgagctgctcgacgacatgatgaaagagatcaactacgagcac
tacctgtacgagaacttcgacgacaaggccgcccaggcccggtggcagaacgtgctcgag
ttcaccaactggctgaaggaacgcggccgcggcgggcgcgagcgcgatggcgaagaaaaa
aacctgctcgagctgacccagatggtggccctgatgtccatgctcgagggccaggacgag
gaacaggatgcggtccgcatgtcgaccctgcatgcatcgaagggcctggagtatccgcat
gtctacctggtcggcgtcgaggaaggcatcctgccgcacaagggcgatcccgacgatccg
gtcgaacgcattgccgcgcgcatccaggaagagcggcgcctgatgtacgtcggcatcacg
cgcgcccagcgcaccctgcatgtcctgtggtgcaagaagcgcaagcgcgccggtgagctc
ttgcattgcgatccgtcccgcttcatcaaggaaatggcgctcgaggtcggcgaagcgcca
cccaaggaagatgaagtgctgagcccgaaggcacgcctggccaatctgaaggccttgctg
gcgacgccgaaggtgtaa

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