Massilia sp. WG5: AM586_02820
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Entry
AM586_02820 CDS
T04122
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
masw
Massilia sp. WG5
Pathway
masw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM586_02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masw03021
]
AM586_02820
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_02820
Enzymes [BR:
masw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM586_02820
Transcription machinery [BR:
masw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM586_02820
DNA repair and recombination proteins [BR:
masw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM586_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF7219
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ALK95382
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All DBs
Position
3792066..3793043
Genome browser
AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIDVETLGAGHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSSLDGVQEDVVDLLLNLKGVVFKVHNRDSVTLTLKKEGEGPVLASDIDLPHDVEL
INPEHVIAHLTAGGKLDMQIKVEKGRGYVPGNVRRLSEDTNKTIGRIILDASFSPVRRVS
YAVESARVEQRTDLDKLIINIETNGVITPEEAIRQSARVLVDQLNVFAALEGTEAAAEAP
SRAPLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagtctgttgaagccacgtattatcgatgtcgagacgctcggcgccggccac
gcaaaagtcgtgatggagccgttcgaacgtggttatggccatacgctgggcaacgcgctg
cgtcgcgtgctgctgtcgtcgatgatcggctacgcgccgaccgaagtgacgatcgccggt
gtcgtgcacgagtactcgtcgctggacggcgtgcaggaagacgtggtcgacctgctgctg
aacctgaagggtgtcgtgttcaaggtccacaaccgcgactccgtgacgctgaccctgaaa
aaggaaggcgaaggccccgtcctggcatcggacatcgacctgccgcatgacgtcgaactg
atcaatccggaacacgtgatcgcccacctgaccgccggcggcaagctggacatgcagatc
aaggtcgagaagggccgtggctatgtgccgggtaacgtgcgccgcctgtcggaagacacc
aacaagaccatcggccgcatcatcctggacgcttcgttctcgccggtgcgtcgcgtgtcc
tacgccgtggaatcggcccgtgtcgaacagcgtaccgacctggacaagctgatcatcaac
atcgagaccaacggcgtcatcaccccggaagaagcgatccgccagtcggcacgcgtgctg
gtcgaccagctgaacgtgttcgccgccctggaaggcaccgaagccgccgccgaagcaccg
tcgcgtgctccgctggtcgatccgatcctgctgcgtccggtggacgacctggaactgacc
gtccgttcggcaaactgcctgaaggccgagaacatctactacatcggcgacctgatccag
cgttcggaaaacgaactgctgaagaccccgaacctgggccgcaagtcgctgaacgagatc
aaggaagtcctggcttcccgtggtctgaccctcggcatgaaactcgagaactggccgccg
gctggcctcgagaaataa
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