Massilia sp. WG5: AM586_02925
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Entry
AM586_02925 CDS
T04122
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
masw
Massilia sp. WG5
Pathway
masw00300
Lysine biosynthesis
masw00470
D-Amino acid metabolism
masw01100
Metabolic pathways
masw01110
Biosynthesis of secondary metabolites
masw01120
Microbial metabolism in diverse environments
masw01230
Biosynthesis of amino acids
Module
masw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AM586_02925
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AM586_02925
Enzymes [BR:
masw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AM586_02925
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALK95402
LinkDB
All DBs
Position
complement(3814732..3816006)
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AA seq
424 aa
AA seq
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MSHFSYQDGVLHAESAPLSAIAQQFGTPTYVYSKAQLLQNFRGYAAPSQGRDALVCYAMK
ANSNLAILDILAREGAGFDIVSGGELLRVIAAGGDPGKVIFSGVGKTVAEIELALEKGIL
CFNVESIPELDRINEVAGRLGKRAPVSLRVNPNVDPKTHPYIATGLKASKFGVAFSDALQ
TYRTAAALPHLEVVGIDCHIGSQLLDDAPLLEALDKLIELIDTLALEGIHLHHLDVGGGL
GIDYGTGDNAPVAIGDYVSRVFARVDAWRAEKHDGKPIKVIFEPGRSIVGNTGVLLMSVE
FLKPGEEKNFCVIDAAMNDMARPALYQAWMDVKPVSPRDGAAVKYDLVGPVCESGDWLAR
DRELAVEPGDVLAMMAAGAYGFTMASNYNTRGRAAEVLVDGDRVHLIRRRETPAELFALE
TIVR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttctcgtaccaagacggcgtcctgcacgccgaaagcgcccccttgtccgca
atcgcccagcagttcggcaccccgacctacgtctattcgaaagcccagctgctgcagaac
ttccgcggttatgcggcgcccagccagggacgtgacgccctggtctgctacgcgatgaag
gcgaattcgaacctggccatcctcgacatcctggcgcgcgaaggcgccggcttcgacatc
gtctcgggcggcgaactgctgcgcgtgatcgccgccggcggcgatccgggcaaggtgatc
ttctcgggcgtgggcaagaccgtggccgagatcgaactggcgctggaaaagggcatcctg
tgcttcaacgtcgagtcgattcccgaactggaccggatcaacgaagtcgccggccgcctc
ggcaagcgcgcgccggtgtcgctgcgcgtgaacccgaacgtcgatccgaagacccatccc
tacatcgccaccggcctgaaggccagcaagttcggcgtggccttctcggatgcgctgcag
acctaccgtaccgcggccgccctgccgcacctggaagtggtcggcatcgactgccacatc
ggctcgcagctgctggacgacgcgccgctgctggaagcgctggacaagctgatcgaactg
atcgacaccctggccctcgagggcatccacctgcaccacctggacgtgggcggcggcctg
ggcatcgactacggcaccggcgacaacgccccggtggcgatcggcgactacgtctcgcgc
gtgttcgcgcgcgtggatgcctggcgcgccgagaagcacgatggcaagccgatcaaggtc
atcttcgaaccgggccgctcgatcgtcggcaataccggcgtgctgctgatgtcggtcgaa
ttcctgaagccgggcgaagaaaagaacttctgcgtgatcgacgccgccatgaacgacatg
gcgcgcccggcactgtaccaggcctggatggacgtcaagcccgtcagcccgcgcgacggc
gccgccgtgaaatacgacctggtgggtccggtctgcgaatcgggcgactggctggcgcgt
gaccgcgaactggcggtcgagccgggcgacgtgctggccatgatggccgccggcgcctac
ggcttcaccatggcctcgaactacaacacccgcggccgcgcggccgaggtgctggtcgac
ggcgaccgggtccacctgatccgccgccgcgagaccccggccgagctgttcgcgctggaa
accatcgtcaggtaa
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