Massilia sp. WG5: AM586_03540 Help Entry AM586_03540       CDS       T04122                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism masw  Massilia sp. WG5 Pathway masw02020   Two-component system masw02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:masw00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AM586_03540  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AM586_03540  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:masw03021]     AM586_03540 Transcription machinery [BR:masw03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AM586_03540 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR Xre-like-HTH HTH_Crp_2 Motif Other DBs NCBI-ProteinID:  ALK95503 LinkDB All DBs Position 3960253..3961737 Genome browser AA seq 494 aa AA seqDB search MKQTLQLKTSQHLALTPQLQQSIRLLQLSTLELHQEIEQVLSDNPLLERLDDPLDRSVRL LADGAINNGASTSTTPDAPPAQSQGEEGKDNAGGEGEGGDSGEAGGAEHDMEWGEPGRSG NGGEDEDGRPQLEASPVSLREHLMEQVRLTCISPRDCALVEIVVDTLDDNGYLEESLDEL HARMPPELEIEFDELRTALSLVQSMDPPGVGARSAAECLALQIRRMPGVPMVTRRMALTI VERYLTWFAQREFNKLKKALDCDDEDLREAQAVIRQCNPHPGAAFASDVSDFVVPDVIVR RAKDGWSVQLNPEVMPRLRVNSIYAALMKQGKSESQLNAQLQEAKWLIKNMRQRFDTILR VAQAIVERQRNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELKYF FGSHVATEAGGEASSTAIRALIVQLTGAEDPKNPLSDSKIAEMLGEQGMVIARRTVAKYR EALKIPPVSLRKSL NT seq 1485 nt NT seq  +upstreamnt  +downstreamnt atgaaacagacgctgcaactcaagacatcacagcaccttgcgctgacgccgcaactccag cagtcgatccggctgctgcagctgtccactctcgagctgcaccaggagatcgagcaggta ctgagcgacaatccgctgctcgagcgcctcgacgatccgctcgaccgctccgtgcgcctg ctggcggacggcgccatcaacaacggcgcctcgacctccaccacgcctgacgcgccgccc gcccagagccagggcgaggagggcaaggacaacgccggcggcgagggcgagggcggcgac agcggcgaggccggcggcgccgagcacgacatggaatggggcgagccgggccgctccggc aacggcggcgaggacgaagacggccgcccgcagctggaagccagcccggtctcgctgcgt gaacacctgatggaacaggtgcgcctgacctgcatctcgccgcgcgactgcgcgctggtc gagatcgtcgtcgataccctcgacgacaacggctacctcgaggaatcgctggacgagctg catgcgcgcatgccgcccgaactggagatcgagttcgacgaactgcgcacggccctgtcg ctggtgcagagcatggacccgcccggcgtcggcgcccgcagcgccgccgaatgcctggcg ctgcagatccgccgcatgcccggcgtgccgatggtgacgcggcgcatggcgctgaccatc gtcgaacgctacctgacctggttcgcgcagcgcgaattcaacaagctcaagaaggccctc gactgcgacgacgaagacctgcgcgaagcccaggccgtgatccgccagtgcaatccgcat ccgggcgcggccttcgcttccgacgtctccgacttcgtggtgccggacgtgatcgtgcgc cgcgcgaaggacggctggagcgtgcagctgaatccggaagtgatgccgcgcctgcgcgtg aacagcatctacgctgccttgatgaagcagggaaaatcggagtcgcagctgaatgcacaa ttgcaagaagcgaagtggctcatcaagaacatgcgccagcgcttcgacacgatcctgcgt gtagcgcaagcaatcgtcgagcgccagcggaactttttctcccacggcgcagttgccatg cggccccttgttttacgtgagatagctgatacactaggtctacacgagagcacaatttct cgcgtcacaacgcagaaatacatgctgacgccgcacggcatgtttgagctgaagtacttt ttcgggagtcacgtcgcgaccgaggcaggaggcgaagcatcctcgaccgcgatccgggct cttatcgtacaactcacaggagcagaagaccccaagaaccctttatccgacagcaagatc gcggagatgctaggggaacagggaatggttatcgcacgccgcacggtcgcgaaataccgt gaggcgctgaagatcccgcccgttagccttcgcaaatccttgtaa

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