Massilia sp. WG5: AM586_05100
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Entry
AM586_05100 CDS
T04122
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
masw
Massilia sp. WG5
Pathway
masw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AM586_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_05100
Enzymes [BR:
masw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
AM586_05100
DNA repair and recombination proteins [BR:
masw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AM586_05100
RecFOR pathway proteins
AM586_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
ALK95748
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All DBs
Position
4317308..4317844
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AA seq
178 aa
AA seq
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MIILGIDPGLRTTGFGVIEKHGHRLRYIASGTIKTGTEGALPPRLKIILSGVTEVVATYK
PACAAIERVFVNVNPQSTLLLGAARGAAIAALVGADLDVGEYTPSEVKQAVVGSGKAVKA
QVQEMVARLLKLPGLPGSDAADALGIAICHAHGMDALALIGALAPEKQALHMRRGRLV
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgattattctcggcatcgacccgggcctgcgcacgacggggttcggggtcatcgaaaaa
cacgggcaccggctgcgctacatcgcttccggcaccatcaagaccggcacggaaggcgcc
ttgccgccgcgcctgaagatcatcctgtccggcgtcaccgaagtcgtcgccacctacaag
ccggcgtgcgcggccatcgaacgcgtcttcgtcaacgtgaatccgcagtcgaccctgctg
ctcggcgcggcgcgcggcgccgccatcgcggccctggtcggcgccgacctcgacgtcggg
gaatacacgccgtccgaggtcaagcaggccgtggtcggttccggcaaggccgtcaaggcc
caggtccaggaaatggtggcgcgcctgttgaagttgccgggcctgcccggctcggatgcc
gccgacgccctcggcatcgcgatctgtcacgcccacggcatggatgcgctggcgctgatc
ggtgcgctggcgccggaaaagcaggccctgcacatgcggcgcggccgccttgtttaa
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