Massilia sp. WG5: AM586_08305
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Entry
AM586_08305 CDS
T04122
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
masw
Massilia sp. WG5
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masw03032
]
AM586_08305
03036 Chromosome and associated proteins [BR:
masw03036
]
AM586_08305
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_08305
DNA replication proteins [BR:
masw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AM586_08305
Chromosome and associated proteins [BR:
masw03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AM586_08305
DNA repair and recombination proteins [BR:
masw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AM586_08305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
CATASP
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
ALK96283
LinkDB
All DBs
Position
5062284..5062589
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELINRLAERYSQLVAKDAEYAVKTILDAMTNALATGQRIEIRGFGSFALNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagctgatcaaccgcctggctgagcgctattcgcagctggtggcaaaa
gatgcggaatatgctgtcaagaccatcctcgatgcgatgaccaacgccctggcgaccggc
cagcgcatcgagatccgcggtttcggcagcttcgcgctgaacagccggccgccccgcatc
ggacgcaatccgaagtccggcgacaaggtgatggtgcccgaaaaacgggtgccccacttc
aagccgggcaagcagttgcgcgaacgggtcgacgcgatggtcgggcaaccgatcatcgaa
gactga
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integrated database retrieval system
