Massilia sp. WG5: AM586_08925
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Entry
AM586_08925 CDS
T04122
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
masw
Massilia sp. WG5
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masw03000
]
AM586_08925
Transcription factors [BR:
masw03000
]
Prokaryotic type
Helix-turn-helix
Other families
AM586_08925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
HTH_psq
HTH_11
Xre-like-HTH
AAA_2
HTH_Tnp_ISL3
HTH_23
RWP-RK
Zeta_toxin
DUF6262
HTH_30
HTH_24
HTH_50
Aldolase
Motif
Other DBs
NCBI-ProteinID:
ALK96385
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Position
complement(5204583..5206217)
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AA seq
544 aa
AA seq
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MSHPTRMPGSSAHDGVDKPVIWTVSVSRLSDLFRDITLEYDHLAQIEPLHLGFDDAARHI
RERMATEHCDVVISAGSNAAYLKGRVAAPVVVAKASGSDLMQALARARRLSPKIAVISYQ
QPMPELADFTATFGLAIAQRTYVTEEDARDAIEELKAAGIEVIVGAGLITDLAEEAGLKA
VFVYSAASIRQAFDDALEMARLTRLENARLKRPAAADSRRARRGLNDLRGESAAMERLRQ
TVVLYARSPATVLIQGETGSGKELVAQAIHREGPRRSALRPFIAVNCGAIAESLLESELF
GHEEGAFTGARRGGHAGLFEAANGGTLFLDEIGEMPLALQTRLLRVLEEREVMRVGGTRP
VPIEVRVISATHCDLDARVREGRFRADLFYRLAVLRLVLPRLAERREDIAPLAEWSLKNA
MAALDARPHPNLAAEIAACAPLLQAYAWPGNVRELRNLMERLALFLAAEPLQALTPAFLL
AVAPELGRGAPVAAPAPAAALPSPAAPTESVAEVLARFEGQREAAARHLGISRTTLWRRL
KSGA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcccacccgcatgccaggcagcagcgcccacgacggcgttgacaagcccgtg
atctggaccgtttcggtgtcgcgcctgtcggacctgttccgcgacatcaccctcgaatac
gaccacctggcccagatcgagccgctgcacctgggcttcgacgacgccgcgcgccacatc
cgcgaacgcatggcgacggaacactgcgacgtcgtgatctcggccggttccaacgccgcc
tacctgaagggccgcgtggcggcgccggtggtggtggcgaaggccagcggctccgacctg
atgcaggcgctggcgcgggcgcgccggttgtcgccgaagatcgccgtgatcagctaccag
cagccgatgccggaactggccgacttcaccgccaccttcggcctggcgatcgcccagcgc
acctacgtgaccgaggaggatgcgcgcgacgccatcgaggagctgaaggcggccggcatc
gaggtgatcgtcggcgccggcctgatcaccgacctggccgaggaggccgggctgaaggcg
gtgttcgtgtattcggccgcctcgatccgccaggccttcgacgacgcgctcgagatggcg
cgcctgacgcgcctggaaaacgcccgcctgaagcgcccggccgctgccgacagccgccgg
gcgcggcgcggcctgaacgacctgcgcggcgagtccgcggcgatggaaaggctgcgccag
accgtggtgctgtatgcgcgttcgccggccaccgtcctgatccagggcgagaccggcagc
ggcaaggaactggtggcccaggccatccaccgcgaaggtccgcggcgctccgccctgcgg
cccttcatcgccgtgaactgcggcgcgatcgccgagtcgctgctggaatccgaactgttc
ggccacgaggaaggcgccttcacaggcgcacgccgcggcggccacgccggcctgttcgag
gcggccaacggcggcaccctgttcctggacgagatcggcgaaatgccgctggccctgcag
acccgcctgctgcgcgtgctggaagagcgcgaggtgatgcgggtcggcggcacgcgtccg
gtgccgatcgaggtgcgcgtgatcagcgccacccactgcgacctcgacgcccgcgtgcgc
gagggacgcttccgcgccgacctgttctatcgcctggcggtgctgcgcctggtgctgccg
aggctggccgaacggcgcgaggacatcgccccgctggccgaatggtcactgaagaatgcg
atggcggcgctcgacgcccgtccgcacccgaatctcgccgccgagatcgcggcctgcgcg
ccgctcctgcaagcctatgcctggcccggcaatgtgcgcgagctgcgcaacctgatggaa
cggctggcgctgttcctggccgccgagccgctgcaggccctgaccccggccttcctgctg
gcggtggcgccggagctgggccggggcgcgcccgtcgccgcccccgccccggcagccgcc
ctgccctcgccggcggcgccgacggagagcgtggccgaggtgctggcccgcttcgagggc
cagcgcgaggccgccgcgcgccacctcggcatcagccgcacgacgctgtggcggcgcctg
aaatccggcgcctga
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