Massilia sp. WG5: AM586_08975
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Entry
AM586_08975 CDS
T04122
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
masw
Massilia sp. WG5
Pathway
masw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AM586_08975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_08975
Enzymes [BR:
masw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AM586_08975
DNA repair and recombination proteins [BR:
masw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AM586_08975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
M64_N
Ig_2_Mok13
Motif
Other DBs
NCBI-ProteinID:
ALK96392
LinkDB
All DBs
Position
complement(5219923..5220687)
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AA seq
254 aa
AA seq
DB search
MKIATWNVNSLKVRLPHLLQWLAANPVDVLCIQETKLTDDKFPVAEINAAGYEVAFTGQK
TYNGVAILARHPLVDVVRNNPHFPDEQQRLIAATVNGVRIICAYVVNGQAVGSDKYTYKM
AWLSSLREWVKEEMAAHPDFAILGDYNIAPEDRDVHDPEAWAGQIHCSEPERDALRALFG
LGLTDAFRLFEQPDKQYSWWDYRQMAFRRNRGLRIDHILLSASLAQRCTACTIDREPRKW
EQPSDHTPVIATIG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagcaacctggaacgtcaactccctgaaagtgcgcctgccgcacctgctgcag
tggctcgccgccaatcccgtcgacgtgctctgcatccaggagaccaagcttaccgacgac
aaattccccgtcgccgagatcaacgcggccggctacgaagtcgcgttcaccggccagaag
acctataacggcgtggccatcctggcgcgccatccgctggtcgatgtggtgcgcaacaat
ccgcatttcccggacgagcagcagcgcctgatcgccgccaccgtgaacggcgtgcgcatc
atctgcgcctatgtggtgaacggacaggcggtcggctccgacaagtacacttacaagatg
gcctggctgtcttccctgcgcgagtgggtgaaggaagagatggcggcgcatccggacttt
gcgatcctgggcgactacaacatcgccccggaagaccgcgacgtgcacgacccggaggca
tgggccggccagatccactgctcggagccggagcgcgatgccctgcgcgcgctgttcggc
ctgggcctgacggacgccttccgcctgttcgagcagccggacaaacagtacagctggtgg
gactaccgccagatggctttccgccgcaaccgcggcctgcgcatcgaccatatcctgctg
tccgccagcctggcgcagcgctgtaccgcctgcaccatcgaccgcgaaccgcgcaagtgg
gagcagccgtccgaccacaccccggtcatcgcaacgatcggctga
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