Massilia sp. WG5: AM586_09360
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Entry
AM586_09360 CDS
T04122
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
masw
Massilia sp. WG5
Pathway
masw00260
Glycine, serine and threonine metabolism
masw00460
Cyanoamino acid metabolism
masw00630
Glyoxylate and dicarboxylate metabolism
masw00670
One carbon pool by folate
masw00680
Methane metabolism
masw01100
Metabolic pathways
masw01110
Biosynthesis of secondary metabolites
masw01120
Microbial metabolism in diverse environments
masw01200
Carbon metabolism
masw01230
Biosynthesis of amino acids
masw01240
Biosynthesis of cofactors
masw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AM586_09360 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AM586_09360 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AM586_09360 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AM586_09360 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AM586_09360 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AM586_09360 (glyA)
Enzymes [BR:
masw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AM586_09360 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
ALK96457
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Position
5304184..5305431
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AA seq
415 aa
AA seq
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MFAKDHTLANVDPELWDAIQKENTRQQDHIELIASENYTSPAVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVISYGLTEQEDIDYEQMERLAREHKPKLIIAGASAFALR
IDFERFARIAKEIGAYFMVDMAHYAGLIAAGEYPNPVPYADFVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKDYQQQVVKNAKALAETLI
ARGLRIVSGRTESHVMLVDLRSKGLTGKEAEAILGQAHMTCNKNGIPNDPQKPFVTSGIR
LGSPAFTTRGFKEEDATKVGHLIADVLDNPHDAATIERVKAEVKKLTDKYPVYAA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaagatcacacgctcgccaacgtcgacccggaactgtgggatgcgatccag
aaggaaaacacccgccagcaagaccacatcgagctgatcgcgtcggagaactatacgtcg
ccggccgtgatgcaggcgcagggctcccagctgaccaacaagtatgccgaaggctacccg
ggcaagcgctattacggcggctgcgaatacgtcgatatcgccgagcagctggcgatcgac
cgcgtcaagcagctgttcggcgccgaagccgccaacgtgcagccgaactcgggctcgcag
gccaaccagggcgtgttcttcgccatgctgaagccgggcgacaccatcatgggcatgtcg
ctggccgaaggcggccacttgacccacggcatggccctgaacatgtcgggtaaatggttc
aacgtcatctcctatggcctgaccgagcaggaagacatcgactacgagcagatggaacgc
ctggcgcgcgagcacaagccgaagctgatcatcgccggcgcctccgccttcgcgctgcgc
atcgacttcgagcgcttcgcccgcatcgccaaggaaatcggcgcctacttcatggtcgac
atggcccactacgccggcctgatcgccgcgggcgagtacccgaatccggtgccgtacgcc
gacttcgtcacctcgaccacccacaagtcgctgcgcggcccgcgcggcggcatcatcctg
atgaaggccgagcacgagaaggccatcaactcggcgatcttcccgggcatccagggcggt
ccgctgatgcacgtgatcgccggcaaggcggtcgccttcaaggaagcgctgtcgccggaa
ttcaaggactaccagcagcaggtggtgaagaacgccaaggccctggccgagaccctgatc
gcgcgcggcctgcgcatcgtatccggccgtaccgagtcgcacgtgatgctggtcgacctg
cgttcgaaaggactgaccggcaaggaagcggaagccatcctgggccaggcacacatgacc
tgcaacaagaacggcatcccgaacgacccgcagaagcccttcgtgacttccggcatccgc
ctcggcagcccggccttcaccacccgcggcttcaaggaagaggacgcgaccaaggtcggc
cacctgatcgccgacgtgctggacaacccgcatgacgccgcgaccatcgagcgcgtcaag
gcggaagtcaagaagctgaccgacaagtacccggtctacgcagcataa
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