Massilia sp. WG5: AM586_09440
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Entry
AM586_09440 CDS
T04122
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
masw
Massilia sp. WG5
Pathway
masw03030
DNA replication
masw03430
Mismatch repair
masw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AM586_09440
03430 Mismatch repair
AM586_09440
03440 Homologous recombination
AM586_09440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masw03032
]
AM586_09440
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_09440
Enzymes [BR:
masw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AM586_09440
DNA replication proteins [BR:
masw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AM586_09440
DNA repair and recombination proteins [BR:
masw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AM586_09440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_16
DNA_pol3_tau_5
AAA_14
AAA_18
AAA_2
nSTAND3
Glyco_tranf_2_5
AAA_19
Mg_chelatase
TsaE
AAA_28
Herpes_Helicase
AAA_assoc_2
Rad17
Herpes_V23
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ALK96469
LinkDB
All DBs
Position
5321874..5324102
Genome browser
AA seq
742 aa
AA seq
DB search
MSYQVLARKYRPRNFETLVGQEHVVRALTHALRTGRLHHAYLFTGTRGVGKTTLSRILAK
SLNCIGPDGQGGITAEPCGVCEPCRAIDAGRFVDYVEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVGHLENILGQEGVSFEQPALRLLAQGAHGSMRDALSLTDQAIAYAAGAVTLD
AVQGMLGALDQSYLVRLLDALARQDGADLMAVADEMASRSLSYNGALQDLGTLLHRIALA
QTVPTAVPEDLPELADIQRLASVFDPQEVQLYYQIAVHGRNEIGLAPDEYAGFTMTLLRM
LAFRPGQGGAEQAAGPAPAALARPLPQAQPARPAAAAAAAAPAAAPARPMAPPPAASAPA
APAAQQAVQAAAPQASGAAAALSPARAAINAALEAARAAARMTTGGGGRRPPGPSEAPAA
AAPQPAAVAPAPAAPPPAPGPAPAASAAPAPAPSARPSAPAPWDQPAARPQPQAAVQQPP
AMARAAQQAQAQGQAHDQAVADDEPPSWVTEFSDDTAVAAEAPAAVSPPPTARVQAPSAA
PHAYTITPVPAIGWDGNWPALAASLPLRGVAQQLAFQTELVDCSSDGASATFRLRVPVDT
LRASGNSEKLCAALQERFPAVRINVDTEIGPVWYTASAEARARREQLQREAEETVAADPF
IQALEQTFDAFVVPGSVRPIGT
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtcctcgcccgcaaataccgtcccaggaacttcgaaacgctggttggc
caggagcacgtggtccgtgccctgacccatgcgttgcgtaccggacgcctgcaccatgct
tacctgttcaccggcacccgcggggtgggcaagacgacactgtcgcgcatcctggccaag
tcgctcaactgcatcggcccggacgggcagggcggcatcacggccgagccgtgcggggtc
tgcgaaccctgccgcgcgatcgacgccggccgcttcgtcgactacgtcgagatggacgcg
gcctcgaaccgcggcgtcgacgagatggcgcagctgctggaacaggcggtgtacgcgccg
agcaatgcacgcttcaaggtctacatgatcgacgaggtgcacatgctcaccaaccacgcc
ttcaacgcgatgctgaagacgctcgaggaaccgcccgagcacgtgaaattcatcctcgcg
accaccgacccgcagaagatcccggtgaccgtgctgtcgcgctgcctgcagttcaacctg
aagcagatgccgcccggccacatcgtcggccacctggaaaacatcctgggccaggaaggc
gtgagtttcgaacagccggccctgcgcctgctggcgcaaggcgcccacggctcgatgcgc
gacgcgctgtcgctgaccgaccaggcgatcgcctacgccgccggcgccgtcacgctcgac
gcggtgcagggcatgctgggtgcgctcgaccagtcctacctggtgcgcctgctggatgca
ctggcgcgccaggacggcgccgacctgatggcggtggccgacgagatggccagccgcagc
ctgtcctacaacggcgcgctgcaggacctcggcacgctgctgcaccgcatcgccctggcc
cagaccgtgccgaccgcggtgccggaagacctgccggaactggccgatatccagcgcctg
gcaagcgtattcgatccgcaggaagtgcagttgtattaccagatcgccgtgcacggccgt
aacgagatcggcctggcgccggacgagtacgccggcttcacgatgaccctgcttcgcatg
ctggccttccgcccgggacagggcggggccgagcaggccgccggcccggcgccggccgcg
ctggcgcgtccgctgccgcaggcccagcccgcgcgtccggccgctgccgccgccgctgct
gcccccgctgctgcccccgcacgtccgatggcgccgccgcctgccgccagcgcccctgcc
gcgcctgccgcacagcaagccgtacaggcggccgcgccccaggcttccggcgctgcagcc
gcgctgagcccggcccgcgccgccatcaatgcggcgctggaagcggcgcgcgccgcggcg
cgcatgacgaccggcggtggcggccgccgtccgcctggaccgtccgaagcgccggctgcc
gccgcaccgcagccggccgcggtggcgcctgctccggcggcgccaccgcccgcgcccggc
ccggcgccggctgccagcgccgcaccggcgcccgcgccgtccgcgcgcccgtccgcgccg
gccccctgggaccagccggccgcgcgtccgcagccgcaggcagccgtccagcagccgccg
gcgatggcccgcgccgcccagcaggcgcaggcacagggccaggcccatgaccaggcggtg
gccgatgacgagccgccctcctgggtgaccgaattttccgacgacaccgcggtcgccgcc
gaggctccggccgcggtgagcccgccgccgaccgcgcgcgtgcaggcgccgagcgcggcg
ccgcatgcctacacgatcacgccggtgccggcgatcggctgggacggcaactggccggcg
ctggccgcctcgctgccgctgcgcggcgtggcccagcagctcgccttccagaccgagctg
gtcgactgcagctcggacggcgcctccgccaccttccgcctgcgcgtgccggtcgatacc
ctgcgcgccagcggcaacagcgaaaagctgtgcgccgccctgcaggaacggtttccggcg
gtacgcatcaatgtcgataccgagatcggaccggtctggtacaccgccagcgccgaagcc
cgggcgcgccgagagcagctgcagcgcgaagccgaggaaacggtcgccgccgatcccttc
atccaggcgctggagcagaccttcgacgccttcgtggtgcccggttcggtgcgcccgatc
ggcacctga
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