Massilia sp. WG5: AM586_10950
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Entry
AM586_10950 CDS
T04122
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
masw
Massilia sp. WG5
Pathway
masw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AM586_10950
09124 Replication and repair
03420 Nucleotide excision repair
AM586_10950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masw03021
]
AM586_10950
03036 Chromosome and associated proteins [BR:
masw03036
]
AM586_10950
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_10950
Enzymes [BR:
masw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AM586_10950
Transcription machinery [BR:
masw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AM586_10950
Chromosome and associated proteins [BR:
masw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AM586_10950
DNA repair and recombination proteins [BR:
masw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AM586_10950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALK96708
LinkDB
All DBs
Position
complement(5669374..5671635)
Genome browser
AA seq
753 aa
AA seq
DB search
MYTVAVRALCEFTAKQGDLDLRFTPSPTALEGIAGHAVVAARRGEHYRSEVTLEGDYGLL
HVRGRADGYDPDQNLIEEVKTFRGQFSSIPDNHRHLHWAQLRIYGHLMCEQLDVQEVNLA
LVYFDIGSQQETVLRETRSRAELKAIFEDHCGRFIAWAEQEMRHRETRNQALTGMRFPHA
DFRPGQRQLAEAVFRANAGKRCLLAQAPTGIGKTLGTMFPALKAAPKENLDKLVFLAAKT
PGRQLALDAAATLKAGGTIPLRVLELTARDKACEHPDKACHGESCPLARGFYDRLPAARA
AALDAPLLDRDTLRTIGLAHDVCPYYLGSEMARWSDMVVGDYNYWFDSGAMLYALALERG
WRVSVLADEAHNLVSRARGMYSATLARASLRAARAVAPPAVQKPLEKVGRAWTDAGKTAP
LPYQVLDAIPQKLLDSLQNATSAITEHMAAVPEGMDPALQEFYFDALQFQRLAESFGEHS
MFDLTRADERDTILAIRNLVPAPFLKPRFALAHSTTLFSATLSPWHYFADLLGMPEDTAW
IDVDSPFVASQLKVEVARGISTRYQHRQASLAPIADLMAQQYADAPGNYLAFFSSFDYLE
KVADTMAQRHPEIPAWRQSRRMSEAERSAFLDRFAADSKGIGFAVLGGAFGEGIDLPGAR
LIGAFVATLGLPQVNPVNEQLRERLQVMFGAGYDYAYLYPGLQKVVQAAGRVIRTEQDQG
TVWLIDDRFARPEVLGLLPRWWHVEARPTSSAP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgtcgccgtcagggcgctgtgcgagttcaccgccaagcagggcgacctcgac
ctgcgcttcacgccctcgcccaccgcactggaaggcatcgccggccatgccgtggtggcg
gcgcggcgcggcgagcattaccgctccgaagtcacgctcgaaggcgactacggcctgctg
cacgtgcgcggccgcgccgacggctacgacccggaccagaacctgatcgaggaagtgaag
accttccgcggccagttctccagcatccccgacaaccaccgccacctgcactgggcccag
ttgcgcatctatggccacctgatgtgcgagcagctcgacgtgcaggaggtcaacctggcc
ctggtctacttcgacatcggcagccagcaggagacggtgctgcgcgagacccgttcgcgc
gccgagctgaaggcgatcttcgaagaccactgcggccgcttcatcgcctgggccgaacag
gagatgcgccaccgcgaaacccgcaaccaggccctgaccggcatgcgctttccgcacgcc
gacttccgcccgggccagcgccagctcgccgaagccgtgttccgcgccaatgccggcaag
cgctgcctgctggcccaggccccgaccggcatcggcaaaacgctcggcacgatgttcccg
gcgctgaaggcggcgccgaaggaaaacctcgacaagctggtgttcctggccgcgaagacc
ccgggacgccagctcgcgctggatgccgcggcgaccctgaaggccggcggcacgattccc
ttgcgggtactggaactgaccgcgcgcgacaaggcctgcgagcatcccgacaaggcctgc
cacggcgagtcctgcccgctggcgcgcggcttctacgaccgcctgccggccgcgcgcgcc
gcagcgctggacgccccgctgctggaccgcgacaccctgcgcacgatcggcctggcccac
gatgtctgcccctactacctgggcagcgagatggcgcgctggagcgacatggtggtgggc
gactacaactactggttcgacagcggcgcgatgctgtacgcgctggcgctggaacgcggc
tggcgcgtcagcgtgctggccgacgaggcccacaacctggtgtcgcgcgcacgcggcatg
tacagcgcgacgctggcaagggcgagcctgcgcgccgcccgcgcggtggccccgcccgcc
gtccagaagccgctggaaaaggtcggtcgcgcatggaccgacgccggcaagaccgcgcct
cttccctaccaggtactggacgcgattccgcaaaaactgctcgacagcctgcagaacgcc
accagcgccatcaccgagcacatggcggccgtccccgaagggatggacccggccctgcag
gagttctatttcgacgccctgcagttccagcgcctggcggaatccttcggcgagcattcg
atgttcgacctcacgcgtgcggacgaaagggacacgatcctggcgatccgcaacctggtt
cccgcgccgttcctgaagccgcgcttcgcactcgcgcattcgaccacgctgttctcggcc
acgctcagcccctggcattatttcgccgacctgctcggcatgcccgaggacacggcctgg
atcgacgtcgactcgcctttcgtcgccagccagttgaaggtcgaagtcgcgcgcgggatt
tcgacgcgctaccagcaccggcaggcttcgctggcgccgatcgccgacctgatggcgcag
cagtacgcagacgcgcccggcaactacctggccttcttcagcagtttcgactatctggaa
aaagtggctgacaccatggcccagcgccatccggagatcccggcctggcgccagtcgcgc
cgcatgagcgaggccgaacggtccgcgttcctcgaccggtttgccgccgacagtaaagga
atcggctttgccgtgctgggcggggctttcggcgaaggcatcgacctgcccggtgcgcgc
ctgatcggcgccttcgtcgccaccctcggcctgccgcaggtgaatccggtcaacgagcag
ctgcgcgaacgcctgcaggtcatgttcggcgccggctacgactacgcctatctgtatccc
ggcctgcagaaggtcgtgcaggcggccgggcgcgtgatccgcaccgagcaggaccagggc
acggtctggctgatcgacgaccgcttcgcgcggcccgaggtgctgggactgctgccgcgc
tggtggcacgtcgaagcacgtcctacttcatcagctccctga
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integrated database retrieval system
