Massilia sp. WG5: AM586_11640
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Entry
AM586_11640 CDS
T04122
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
masw
Massilia sp. WG5
Pathway
masw00362
Benzoate degradation
masw00624
Polycyclic aromatic hydrocarbon degradation
masw01100
Metabolic pathways
masw01120
Microbial metabolism in diverse environments
masw01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AM586_11640
00624 Polycyclic aromatic hydrocarbon degradation
AM586_11640
Enzymes [BR:
masw01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
AM586_11640
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ALK96820
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Position
complement(5808072..5808764)
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AA seq
230 aa
AA seq
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MKFDAIEPGVYPELVYPAYKSTVKRGPLQPMLRIEAPAPVTRNIVAGPHILLPNDADLTV
HGQGEPLGEKIVVTGRVVDEDGKPVRNSLLEVWQANSAGRYWHSKDQHAAPLDPNFHGLG
KMLTDDDGRYRFVTIKPGPYPWGNHDKAWRPAHIHFSLFGNVYAQRLVTQMYFPSDPLFD
YDPIFQSVPDEAARQRLVSRFSLEHTVGAEMLGYEFDIVLRGRDATPMGL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcgatgccatcgagccgggcgtctacccggaactcgtctaccccgcctacaaa
tcgaccgtcaagcgcggcccgctccagcccatgctgcgcatcgaggccccggcgccggtc
acccgcaacatcgtcgccggtccccacatcctgctgccgaacgacgccgacctgaccgtc
cacggccagggcgagccgctgggcgagaagatcgtggtcaccggccgcgtggtcgacgag
gacggcaagcccgtgcgcaactcgctgctcgaagtctggcaggccaattccgccggccgc
tactggcacagcaaggaccagcacgcggcgccgctcgacccgaacttccacggcctcggc
aagatgctgaccgacgacgacggccgctaccgcttcgtcaccatcaagcccggcccctac
ccctggggcaaccacgacaaggcctggcgcccggcccacatccacttctcgctgttcggg
aacgtgtacgcgcagcgcctggtgacccagatgtacttccccagcgatccgctgttcgac
tacgacccgatcttccagagcgtgccggacgaggcggcgcgccagcggctggtctcgcgc
ttcagtctcgagcacacggtcggcgccgagatgctgggctacgaattcgatatcgtcctg
cgcggacgcgacgccaccccgatgggcctgtaa
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