KEGG   Massilia sp. WG5: AM586_12140
Entry
AM586_12140       CDS       T04122                                 
Name
(GenBank) DNA repair protein
  KO
K10979  DNA end-binding protein Ku
Organism
masw  Massilia sp. WG5
Pathway
masw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:masw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AM586_12140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:masw03400]
    AM586_12140
DNA repair and recombination proteins [BR:masw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AM586_12140
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ALK96898
LinkDB
Position
complement(5924339..5925415)
AA seq 358 aa
MARSMWKGAISFGLVHIPVELYPATSEHSLDLHMLDRRDFAPIGFKRYNKNTGKEVSWDD
IIKGYEYADDEYVVLSDEDLRRANPEATQTIDILAFVDAQQVPLIYYEQPYYLAPGKGGD
KVYALLRETLRDVGKIGIANVVIRVKQHLAALVCVGDTIVLITLRYPDEIRPTDELKIPD
ENSKAAQVTPKELQMARALVEGMSERWKPQQYHDTYREDVMAMVKKKIAAKQTKTITMPE
PEEEDKPKKSNVIDLVSLLQASLGKKAPAHADGDDDDDDPPPRKSRKPSGDKDEDAGDAP
PPRARKTASQDTVRARATAAKKPAARKTATAAAKPAAKKAVAKSATAAKAPAKRRKAA
NT seq 1077 nt   +upstreamnt  +downstreamnt
atggcgaggagcatgtggaagggggcgatcagtttcgggctggtccatattcccgtcgaa
ctgtacccggcaacgagcgaacacagcctggacctgcacatgctcgaccgccgtgacttc
gcgccgatcggcttcaagcgctacaacaagaacaccggcaaggaagtctcctgggacgac
atcatcaagggctacgaatacgccgatgacgaatacgtggtgctgtccgacgaggacctg
cgccgcgcgaatccggaagccacccagaccatcgacatcctggccttcgtcgatgcccag
caggtgccgctgatctactacgagcagccctactacctcgcgcccggcaagggcggcgac
aaggtctacgcgctgctgcgcgagaccctgcgcgacgtcggcaagatcggcatcgccaac
gtcgtcatccgcgtcaagcagcacctggcggcactggtgtgcgtgggcgataccatcgtc
ctgatcaccctgcgctacccggacgagatccgccccaccgacgaactgaagatccccgac
gagaattcgaaggcggcccaggtgacaccgaaggaactgcagatggccagggcgctggtc
gaaggcatgagcgagcgctggaagccgcagcagtatcacgacacctaccgcgaggacgtg
atggcgatggtgaagaagaagatcgcggccaagcagaccaagaccatcaccatgccggag
ccggaggaggaggacaagccgaagaaatcgaacgtcatcgacctggtctcgctgctgcag
gccagcctgggcaagaaggcgcccgcgcacgcggacggcgacgacgacgacgacgatcca
ccgccgcgcaagtcgcgcaagccgtcgggcgacaaagacgaggacgccggcgacgcgccg
ccgccgcgcgcgcgcaagacggcatcgcaggacaccgtgcgggcgcgcgccaccgcggcg
aagaagccggcggccaggaagacggcgactgccgccgccaaaccggccgccaagaaggcc
gtcgccaaatccgccaccgcggccaaggcgccggccaagcgcaggaaggcggcctga

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