Massilia sp. WG5: AM586_12140
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Entry
AM586_12140 CDS
T04122
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
masw
Massilia sp. WG5
Pathway
masw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AM586_12140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_12140
DNA repair and recombination proteins [BR:
masw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AM586_12140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ALK96898
LinkDB
All DBs
Position
complement(5924339..5925415)
Genome browser
AA seq
358 aa
AA seq
DB search
MARSMWKGAISFGLVHIPVELYPATSEHSLDLHMLDRRDFAPIGFKRYNKNTGKEVSWDD
IIKGYEYADDEYVVLSDEDLRRANPEATQTIDILAFVDAQQVPLIYYEQPYYLAPGKGGD
KVYALLRETLRDVGKIGIANVVIRVKQHLAALVCVGDTIVLITLRYPDEIRPTDELKIPD
ENSKAAQVTPKELQMARALVEGMSERWKPQQYHDTYREDVMAMVKKKIAAKQTKTITMPE
PEEEDKPKKSNVIDLVSLLQASLGKKAPAHADGDDDDDDPPPRKSRKPSGDKDEDAGDAP
PPRARKTASQDTVRARATAAKKPAARKTATAAAKPAAKKAVAKSATAAKAPAKRRKAA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggagcatgtggaagggggcgatcagtttcgggctggtccatattcccgtcgaa
ctgtacccggcaacgagcgaacacagcctggacctgcacatgctcgaccgccgtgacttc
gcgccgatcggcttcaagcgctacaacaagaacaccggcaaggaagtctcctgggacgac
atcatcaagggctacgaatacgccgatgacgaatacgtggtgctgtccgacgaggacctg
cgccgcgcgaatccggaagccacccagaccatcgacatcctggccttcgtcgatgcccag
caggtgccgctgatctactacgagcagccctactacctcgcgcccggcaagggcggcgac
aaggtctacgcgctgctgcgcgagaccctgcgcgacgtcggcaagatcggcatcgccaac
gtcgtcatccgcgtcaagcagcacctggcggcactggtgtgcgtgggcgataccatcgtc
ctgatcaccctgcgctacccggacgagatccgccccaccgacgaactgaagatccccgac
gagaattcgaaggcggcccaggtgacaccgaaggaactgcagatggccagggcgctggtc
gaaggcatgagcgagcgctggaagccgcagcagtatcacgacacctaccgcgaggacgtg
atggcgatggtgaagaagaagatcgcggccaagcagaccaagaccatcaccatgccggag
ccggaggaggaggacaagccgaagaaatcgaacgtcatcgacctggtctcgctgctgcag
gccagcctgggcaagaaggcgcccgcgcacgcggacggcgacgacgacgacgacgatcca
ccgccgcgcaagtcgcgcaagccgtcgggcgacaaagacgaggacgccggcgacgcgccg
ccgccgcgcgcgcgcaagacggcatcgcaggacaccgtgcgggcgcgcgccaccgcggcg
aagaagccggcggccaggaagacggcgactgccgccgccaaaccggccgccaagaaggcc
gtcgccaaatccgccaccgcggccaaggcgccggccaagcgcaggaaggcggcctga
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